RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ERLIN2O94905 339 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 ADSSP30520 456 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 DUPD1Q68J44 220 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 TTC27Q6P3X3 843 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 FAM114A2Q9NRY5 505 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 TTC7AQ9ULT0 858 aaPredicted RBP27.55■■■□□ 2
RAB40C-201ENST00000248139 USP20Q9Y2K6 914 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 PTPN22Q9Y2R2 807 aa27.55■■■□□ 2
RAB40C-201ENST00000248139 ASTN2O75129 1339 aaPredicted RBP27.55■■■□□ 2
RAB40C-201ENST00000248139 KCNJ1P48048 391 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 GPC5P78333 572 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 PRELID2Q8N945 189 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 EPS8L1Q8TE68 723 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 TMEM206Q9H813 350 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 SLC12A6Q9UHW9 1150 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 ATP8B3O60423 1300 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 TLDC2A0PJX2 215 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 PYGMP11217 842 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 MUTP22033 750 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 ZDHHC18Q9NUE0 388 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 CAND2O75155 1236 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 CETN1Q12798 172 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 QPCTQ16769 361 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 XKR9Q5GH70 373 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 EMC10Q5UCC4 262 aa27.54■■■□□ 2
RAB40C-201ENST00000248139 SYTL5Q8TDW5 730 aaPredicted RBP27.54■■■□□ 2
RAB40C-201ENST00000248139 COL4A5P29400 1685 aa27.53■■■□□ 2
RAB40C-201ENST00000248139 RPS6P62753 249 aaKnown RBP27.53■■■□□ 2
RAB40C-201ENST00000248139 SP4Q02446 784 aa27.53■■■□□ 2
RAB40C-201ENST00000248139 GOLGA6L10A0A0M3HER8 536 aa27.53■■■□□ 2
RAB40C-201ENST00000248139 TESPA1A2RU30 521 aaPredicted RBP27.53■■■□□ 2
RAB40C-201ENST00000248139 CCNE2O96020 404 aa27.53■■■□□ 2
RAB40C-201ENST00000248139 IFT88Q13099 833 aa27.53■■■□□ 2
RAB40C-201ENST00000248139 RNF187Q5TA31 235 aaPredicted RBP27.53■■■□□ 2
RAB40C-201ENST00000248139 EPB41L4BQ9H329 900 aa27.53■■■□□ 2
RAB40C-201ENST00000248139 CLSTN1O94985 981 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 RHOT2Q8IXI1 618 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 PI4K2AQ9BTU6 479 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 NOCTQ9UK39 431 aaKnown RBP27.52■■■□□ 2
RAB40C-201ENST00000248139 TNIP1Q15025 636 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 C2CD6Q53TS8 623 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 ZDHHC24Q6UX98 284 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 WNK4Q96J92 1243 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 ZSWIM1Q9BR11 485 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 RAB17Q9H0T7 212 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 UBIAD1Q9Y5Z9 338 aa27.52■■■□□ 2
RAB40C-201ENST00000248139 KIAA0391O15091 583 aaKnown RBP27.51■■□□□ 1.99
RAB40C-201ENST00000248139 MTMR3Q13615 1198 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 SNRNP35Q16560 246 aaKnown RBP27.51■■□□□ 1.99
RAB40C-201ENST00000248139 RUFY4Q6ZNE9 571 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 PNMA2Q9UL42 364 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 TRPC6Q9Y210 931 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 RPL21P46778 160 aaKnown RBP27.51■■□□□ 1.99
RAB40C-201ENST00000248139 PPP2R2AP63151 447 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 GTF2BQ00403 316 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 OTUD6BQ8N6M0 293 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 C1orf131Q8NDD1 294 aaKnown RBP27.51■■□□□ 1.99
RAB40C-201ENST00000248139 TAS1R2Q8TE23 839 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 RNF25Q96BH1 459 aaPredicted RBP27.51■■□□□ 1.99
RAB40C-201ENST00000248139 RPTORQ8N122 1335 aa27.51■■□□□ 1.99
RAB40C-201ENST00000248139 A6NNZ2 444 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 RASA3Q14644 834 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 TUBB8Q3ZCM7 444 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 B4GALNT4Q76KP1 1039 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 PRPF38AQ8NAV1 312 aaKnown RBP27.5■■□□□ 1.99
RAB40C-201ENST00000248139 SUPT20HQ8NEM7 779 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 TATDN2Q93075 761 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 NUP85Q9BW27 656 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 CAPN7Q9Y6W3 813 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 COL2A1P02458 1487 aaPredicted RBP27.5■■□□□ 1.99
RAB40C-201ENST00000248139 RTN2O75298 545 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 EGFRP00533 1210 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 DLATP10515 647 aaKnown RBP27.5■■□□□ 1.99
RAB40C-201ENST00000248139 PTGIRP43119 386 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 FMO1Q01740 532 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 LLGL2Q6P1M3 1020 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 BSNDQ8WZ55 320 aa27.5■■□□□ 1.99
RAB40C-201ENST00000248139 PPFIA2O75334 1257 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 ASNSP08243 561 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 PEX5P50542 639 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 CYFIP2Q96F07 1278 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 TXLNGYQ9BZA5 131 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 TRIM7Q9C029 511 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 SEMA4AQ9H3S1 761 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 SPOPO43791 374 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 FAM107AO95990 144 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 LMBRD2Q68DH5 695 aaPredicted RBP27.49■■□□□ 1.99
RAB40C-201ENST00000248139 FAM71AQ8IYT1 594 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 UBL4BQ8N7F7 174 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 NEK9Q8TD19 979 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 RAPGEF5Q92565 580 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 GRHL1Q9NZI5 618 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 TCEAL9Q9UHQ7 104 aa27.49■■□□□ 1.99
RAB40C-201ENST00000248139 DBR1Q9UK59 544 aaKnown RBP27.49■■□□□ 1.99
RAB40C-201ENST00000248139 WNT10BO00744 389 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 MEFVO15553 781 aaPredicted RBP27.48■■□□□ 1.99
RAB40C-201ENST00000248139 KIAA0754O94854 1291 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 FGFR4P22455 802 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 CNGA1P29973 690 aa27.48■■□□□ 1.99
RAB40C-201ENST00000248139 SLCO1A2P46721 670 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms