RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SLFN12LQ6IEE8 588 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 H2AFVQ71UI9 128 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 CCDC127Q96BQ5 260 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 CAPZA3Q96KX2 299 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 MMS19Q96T76 1030 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 EPC1Q9H2F5 836 aa25.21■■□□□ 1.63
MSX2-201ENST00000239243 A0A0A6YYK5 440 aaPredicted RBP25.2■■□□□ 1.62
MSX2-201ENST00000239243 CCDC151A5D8V7 595 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 LRRIQ4A6NIV6 560 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 ZNF233A6NK53 670 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 LRRIQ3A6PVS8 624 aaPredicted RBP25.2■■□□□ 1.62
MSX2-201ENST00000239243 GAS2O43903 313 aaKnown RBP25.2■■□□□ 1.62
MSX2-201ENST00000239243 MAFO75444 373 aaPredicted RBP25.2■■□□□ 1.62
MSX2-201ENST00000239243 LGR5O75473 907 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 PLPPR4Q7Z2D5 763 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 GPRC5AQ8NFJ5 357 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 SLC30A5Q8TAD4 765 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 ASAP3Q8TDY4 903 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 OSBPL9Q96SU4 736 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 GPR20Q99678 358 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 STYXL1Q9Y6J8 313 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 SIP14410 1827 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 K7ERI5 159 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 EXTL3O43909 919 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 ARIH2O95376 493 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 FKBP1BP68106 108 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 GLG1Q92896 1179 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 TMEM134Q9H6X4 195 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 ANKZF1Q9H8Y5 726 aa25.2■■□□□ 1.62
MSX2-201ENST00000239243 PALMO75781 387 aa25.19■■□□□ 1.62
MSX2-201ENST00000239243 SLC26A2P50443 739 aa25.19■■□□□ 1.62
MSX2-201ENST00000239243 GTF2A2P52657 109 aa25.19■■□□□ 1.62
MSX2-201ENST00000239243 ITIH3Q06033 890 aa25.19■■□□□ 1.62
MSX2-201ENST00000239243 DHX37Q8IY37 1157 aaKnown RBP25.19■■□□□ 1.62
MSX2-201ENST00000239243 SYT11Q9BT88 431 aa25.19■■□□□ 1.62
MSX2-201ENST00000239243 ZNF408Q9H9D4 720 aa25.19■■□□□ 1.62
MSX2-201ENST00000239243 GPC3P51654 580 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 MAP2K1Q02750 393 aaPredicted RBP25.18■■□□□ 1.62
MSX2-201ENST00000239243 ZNF572Q7Z3I7 529 aaPredicted RBP25.18■■□□□ 1.62
MSX2-201ENST00000239243 FBXL13Q8NEE6 735 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 U2AF1L4Q8WU68 220 aaKnown RBP25.18■■□□□ 1.62
MSX2-201ENST00000239243 TLR10Q9BXR5 811 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 OGFRQ9NZT2 677 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 RNF14Q9UBS8 474 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 RAB21Q9UL25 225 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 FOXN3O00409 490 aaPredicted RBP25.18■■□□□ 1.62
MSX2-201ENST00000239243 CYP2C8P10632 490 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 MFAP3P55082 362 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 TTLL4Q14679 1199 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 CCDC62Q6P9F0 684 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 ARHGEF19Q8IW93 802 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 TCP11Q8WWU5 503 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 FAM213AQ9BRX8 229 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 ARFGAP3Q9NP61 516 aa25.18■■□□□ 1.62
MSX2-201ENST00000239243 ZNFX1Q9P2E3 1918 aaKnown RBP25.18■■□□□ 1.62
MSX2-201ENST00000239243 ATP8B1O43520 1251 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 LRRN2O75325 713 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 LDHAP00338 332 aaKnown RBP25.17■■□□□ 1.62
MSX2-201ENST00000239243 TNFAIP3P21580 790 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 CREG2Q8IUH2 290 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 FBXO16Q8IX29 292 aaPredicted RBP25.17■■□□□ 1.62
MSX2-201ENST00000239243 NOA1Q8NC60 698 aaKnown RBP25.17■■□□□ 1.62
MSX2-201ENST00000239243 LNX1Q8TBB1 728 aaPredicted RBP25.17■■□□□ 1.62
MSX2-201ENST00000239243 LMBR1Q8WVP7 490 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 ZNF446Q9NWS9 450 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 ZNF185O15231 689 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 HSDL1Q3SXM5 330 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 IER5Q5VY09 327 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 GLYCTKQ8IVS8 523 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 ATP8B4Q8TF62 1192 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 SCFD2Q8WU76 684 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 FAM81BQ96LP2 452 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 SPATA33Q96N06 139 aa25.17■■□□□ 1.62
MSX2-201ENST00000239243 JPH2Q9BR39 696 aaPredicted RBP25.17■■□□□ 1.62
MSX2-201ENST00000239243 PDHXO00330 501 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 ERLIN1O75477 346 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 PAFAH1B1P43034 410 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 GCLCP48506 637 aaPredicted RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 CCDC181Q5TID7 509 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 MAP1SQ66K74 1059 aaPredicted RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 NFRKBQ6P4R8 1299 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 NT5C1BQ96P26 610 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 ARID3AQ99856 593 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 EFCC1Q9HA90 598 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 RAB20Q9NX57 234 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 AGO2Q9UKV8 859 aaKnown RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 TXNP10599 105 aaKnown RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 MCM3P25205 808 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 EFNA5P52803 228 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 MEI1Q5TIA1 1274 aa25.16■■□□□ 1.62
MSX2-201ENST00000239243 CC2D1AQ6P1N0 951 aaPredicted RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 HNRNPLLQ8WVV9 542 aaKnown RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 PSPC1Q8WXF1 523 aaKnown RBP25.16■■□□□ 1.62
MSX2-201ENST00000239243 GRID2IPA4D2P6 1211 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 ADCY3O60266 1144 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 ZC3H11AO75152 810 aaKnown RBP eCLIP25.15■■□□□ 1.62
MSX2-201ENST00000239243 ZRANB2O95218 330 aaKnown RBP eCLIP25.15■■□□□ 1.62
MSX2-201ENST00000239243 RHOXF2BP0C7M4 288 aa25.15■■□□□ 1.62
MSX2-201ENST00000239243 NOP2P46087 812 aaKnown RBP25.15■■□□□ 1.62
MSX2-201ENST00000239243 PSMD6Q15008 389 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms