RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 HAS1Q92839 578 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 HES6Q96HZ4 224 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 PACSIN1Q9BY11 444 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 ACAD9Q9H845 621 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 NOC2LQ9Y3T9 749 aaKnown RBP22.22■■□□□ 1.15
SNX3-201ENST00000230085 NUDT17P0C025 328 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 COPB2P35606 906 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 JAM2P57087 298 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 HLTFQ14527 1009 aaKnown RBP eCLIP22.22■■□□□ 1.15
SNX3-201ENST00000230085 LRRC41Q15345 812 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 ZNF571Q7Z3V5 609 aaPredicted RBP22.22■■□□□ 1.15
SNX3-201ENST00000230085 METTL13Q8N6R0 699 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 FAM133AQ8N9E0 248 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 OSBPL7Q9BZF2 842 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 TMEM260Q9NX78 707 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 MCM8Q9UJA3 840 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 IVNS1ABPQ9Y6Y0 642 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 NCANO14594 1321 aa22.22■■□□□ 1.15
SNX3-201ENST00000230085 OPLAHO14841 1288 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 DRG2P55039 364 aaKnown RBP22.21■■□□□ 1.15
SNX3-201ENST00000230085 KCNH2Q12809 1159 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 KLHL7Q8IXQ5 586 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 CACNA2D3Q8IZS8 1091 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 MBOAT7Q96N66 472 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 GLT8D2Q9H1C3 349 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 FBXO40Q9UH90 709 aa22.21■■□□□ 1.15
SNX3-201ENST00000230085 MRPL11Q9Y3B7 192 aaKnown RBP22.21■■□□□ 1.15
SNX3-201ENST00000230085 ZNFX1Q9P2E3 1918 aaKnown RBP22.21■■□□□ 1.15
SNX3-201ENST00000230085 F8VZ95 297 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 SLC16A3O15427 465 aaKnown RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 GSTA1P08263 222 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 UCHL3P15374 230 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 BYSLQ13895 437 aaKnown RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 ECM1Q16610 540 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 BMT2Q1RMZ1 405 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 MOXD1Q6UVY6 613 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 VPS36Q86VN1 386 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 FUKQ8N0W3 1084 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 KCTD17Q8N5Z5 321 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 SEC16BQ96JE7 1060 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 MMP19Q99542 508 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 PLXNB2O15031 1838 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 STRNO43815 780 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 RDXP35241 583 aaKnown RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 TRAF1Q13077 416 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 RNF187Q5TA31 235 aaPredicted RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 ALKBH5Q6P6C2 394 aaKnown RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 NSMFQ6X4W1 530 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 EPM2AIP1Q7L775 607 aaPredicted RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 FMNL3Q8IVF7 1028 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 ANKRD35Q8N283 1001 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.2■■□□□ 1.14
SNX3-201ENST00000230085 NEUROG2Q9H2A3 272 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 CCDC134Q9H6E4 229 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 METTL14Q9HCE5 456 aaKnown RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 GJD2Q9UKL4 321 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 GABRQQ9UN88 632 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 PACSIN2Q9UNF0 486 aaPredicted RBP22.2■■□□□ 1.14
SNX3-201ENST00000230085 STK24Q9Y6E0 443 aa22.2■■□□□ 1.14
SNX3-201ENST00000230085 CEP104O60308 925 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 AFPP02771 609 aaKnown RBP22.19■■□□□ 1.14
SNX3-201ENST00000230085 ADORA2AP29274 412 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 ADAM9Q13443 819 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 GRB14Q14449 540 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 KCTD2Q14681 263 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 ERMARDQ5T6L9 678 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 GKAP1Q5VSY0 366 aaPredicted RBP22.19■■□□□ 1.14
SNX3-201ENST00000230085 NT5DC3Q86UY8 548 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 CCT6BQ92526 530 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 RAPGEF5Q92565 580 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 PGM2Q96G03 612 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 RAB17Q9H0T7 212 aa22.19■■□□□ 1.14
SNX3-201ENST00000230085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.19■■□□□ 1.14
SNX3-201ENST00000230085 CYP3A7-CYP3A51PA0A087WV96 503 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 PDXKO00764 312 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 PGK2P07205 417 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 CYP11B2P19099 503 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 DRD4P21917 467 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 CYP3A7P24462 503 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 GBP1P32455 592 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 MRPL12P52815 198 aaKnown RBP22.18■■□□□ 1.14
SNX3-201ENST00000230085 SNCBQ16143 134 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 NFIL3Q16649 462 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 MORN1Q5T089 497 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 CYB5D1Q6P9G0 228 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 HOOK3Q86VS8 718 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 TMEM109Q9BVC6 243 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 DONSONQ9NYP3 566 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 DDX25Q9UHL0 483 aaKnown RBP22.18■■□□□ 1.14
SNX3-201ENST00000230085 TRIM17Q9Y577 477 aa22.18■■□□□ 1.14
SNX3-201ENST00000230085 KRIT1O00522 736 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 CFBP00751 764 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 H2AFZP0C0S5 128 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PLA2G4BP0C869 781 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PTENP60484 403 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 PRKCZQ05513 592 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 ITIH4Q14624 930 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 EPHA7Q15375 998 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 H2AFVQ71UI9 128 aa22.17■■□□□ 1.14
SNX3-201ENST00000230085 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms