RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 ZNF710Q8N1W2 664 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 TMEM174Q8WUU8 243 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 HAPLN2Q9GZV7 340 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 UNC93B1Q9H1C4 597 aa19.7■□□□□ 0.74
CBX1-201ENST00000225603 ARMCX3Q9UH62 379 aaPredicted RBP19.7■□□□□ 0.74
CBX1-201ENST00000225603 SIP14410 1827 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 EPB41P11171 864 aaKnown RBP19.69■□□□□ 0.74
CBX1-201ENST00000225603 ABCD1P33897 745 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 PSMC2P35998 433 aaKnown RBP19.69■□□□□ 0.74
CBX1-201ENST00000225603 LIG4P49917 911 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 GPC3P51654 580 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 NLRP11P59045 1033 aaKnown RBP19.69■□□□□ 0.74
CBX1-201ENST00000225603 MYBPC2Q14324 1141 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 MTERF4Q7Z6M4 381 aaKnown RBP19.69■□□□□ 0.74
CBX1-201ENST00000225603 RNF180Q86T96 592 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 FAM186BQ8IYM0 893 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 DNAJB3Q8WWF6 145 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 SAAL1Q96ER3 474 aa19.69■□□□□ 0.74
CBX1-201ENST00000225603 SMIM35A0A1B0GVV1 85 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 INO80B-WBP1J3KQ70 363 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 PIGRP01833 764 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 PRKCBP05771 671 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 SCP2P22307 547 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 MTFR1Q15390 333 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 GDF6Q6KF10 455 aaPredicted RBP19.68■□□□□ 0.74
CBX1-201ENST00000225603 CCDC155Q8N6L0 562 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 PCSK9Q8NBP7 692 aaKnown RBP19.68■□□□□ 0.74
CBX1-201ENST00000225603 INO80BQ9C086 356 aaPredicted RBP19.68■□□□□ 0.74
CBX1-201ENST00000225603 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.68■□□□□ 0.742e-6■■■■□ 26.6
CBX1-201ENST00000225603 C2orf40Q9H1Z8 148 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 NDST4Q9H3R1 872 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 FZD8Q9H461 694 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 CDHR5Q9HBB8 845 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 GTF2IRD1Q9UHL9 959 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 MAPK6Q16659 721 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 KIZQ2M2Z5 673 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 TMEM139Q8IV31 216 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 XXYLT1Q8NBI6 393 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 POMGNT1Q8WZA1 660 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 MKNK1Q9BUB5 465 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 NFKBIZQ9BYH8 718 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 ADAMTS10Q9H324 1103 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 FRMD4BQ9Y2L6 1034 aa19.68■□□□□ 0.74
CBX1-201ENST00000225603 B4GALT5O43286 388 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 CCP110O43303 1012 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 GPR32O75388 356 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 PHKA2P46019 1235 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 ACLYP53396 1101 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 NLRP7Q8WX94 980 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.67■□□□□ 0.74
CBX1-201ENST00000225603 STYXL1Q9Y6J8 313 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 ADRB2P07550 413 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 FAM47CQ5HY64 1035 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
CBX1-201ENST00000225603 CBWD2Q8IUF1 395 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 TC2NQ8N9U0 490 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 KIF18AQ8NI77 898 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 GINS2Q9Y248 185 aa19.67■□□□□ 0.74
CBX1-201ENST00000225603 DNAH12Q6ZR08 3092 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 GNAT1P11488 350 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 KLK7P49862 253 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 ACO2Q99798 780 aaKnown RBP19.66■□□□□ 0.74
CBX1-201ENST00000225603 MRPL4Q9BYD3 311 aaKnown RBP19.66■□□□□ 0.74
CBX1-201ENST00000225603 METTL14Q9HCE5 456 aaKnown RBP19.66■□□□□ 0.74
CBX1-201ENST00000225603 ACKR2O00590 384 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 ARHGAP6O43182 974 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 HSPA8P11142 646 aaKnown RBP19.66■□□□□ 0.74
CBX1-201ENST00000225603 GARTP22102 1010 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 AMHR2Q16671 573 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 SLC9C1Q4G0N8 1177 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 DCAF17Q5H9S7 520 aaPredicted RBP19.66■□□□□ 0.74
CBX1-201ENST00000225603 PLEKHO2Q8TD55 490 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 WNT8BQ93098 351 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 SLC35C1Q96A29 364 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 SCLT1Q96NL6 688 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 ANKFY1Q9P2R3 1169 aa19.66■□□□□ 0.74
CBX1-201ENST00000225603 KCNH2Q12809 1159 aa19.65■□□□□ 0.74
CBX1-201ENST00000225603 ZPBP2Q6X784 338 aa19.65■□□□□ 0.74
CBX1-201ENST00000225603 CDR2LQ86X02 465 aaPredicted RBP19.65■□□□□ 0.74
CBX1-201ENST00000225603 VTI1AQ96AJ9 217 aa19.65■□□□□ 0.74
CBX1-201ENST00000225603 FBXL18Q96ME1 805 aa19.65■□□□□ 0.74
CBX1-201ENST00000225603 BAG1Q99933 345 aaPredicted RBP19.65■□□□□ 0.74
CBX1-201ENST00000225603 ABLIM1O14639 778 aa19.64■□□□□ 0.74
CBX1-201ENST00000225603 FGFR4P22455 802 aa19.64■□□□□ 0.74
CBX1-201ENST00000225603 SYCP1Q15431 976 aa19.64■□□□□ 0.74
CBX1-201ENST00000225603 ZBTB41Q5SVQ8 909 aa19.64■□□□□ 0.74
CBX1-201ENST00000225603 ZNF410Q86VK4 478 aa19.64■□□□□ 0.74
CBX1-201ENST00000225603 PAK6Q9NQU5 681 aaPredicted RBP19.64■□□□□ 0.74
CBX1-201ENST00000225603 A0A0B4J269 797 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 TUBB4AP04350 444 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 TRIM49P0CI25 452 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 TRIM49CP0CI26 452 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 ADKP55263 362 aaKnown RBP19.64■□□□□ 0.73
CBX1-201ENST00000225603 DLG4P78352 724 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 PRPF4BQ13523 1007 aaKnown RBP19.64■□□□□ 0.73
CBX1-201ENST00000225603 SNRNP35Q16560 246 aaKnown RBP19.64■□□□□ 0.73
CBX1-201ENST00000225603 TCERG1LQ5VWI1 586 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 EEF1DP3Q658K8 133 aa19.64■□□□□ 0.73
CBX1-201ENST00000225603 ZBTB33Q86T24 672 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms