RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CNTFP26441 200 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 VAMP7P51809 220 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SBK1Q52WX2 424 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 DDI1Q8WTU0 396 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ING2Q9H160 280 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 SCHIP1Q9P0W5 487 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 NDUFB9Q9Y6M9 179 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 COL3A1P02461 1466 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 NEDD4P46934 1319 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 hCG_1642624A0A1W2PR95 340 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 STRNO43815 780 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 TNFRSF8P28908 595 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 NEK2P51955 445 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ARFIP2P53365 341 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GTF2IP78347 998 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GRM1Q13255 1194 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 KCTD2Q14681 263 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 MAEAQ7L5Y9 396 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 TRPM8Q7Z2W7 1104 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 COL23A1Q86Y22 540 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 PAWRQ96IZ0 340 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 CEP170P1Q96L14 293 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CCT8L2Q96SF2 557 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 TSSK1BQ9BXA7 367 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 C17orf75Q9HAS0 396 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 EFCAB14O75071 495 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 EEF1B2P24534 225 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 LSP1P33241 339 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 HADHAP40939 763 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GOLGA8FQ08AF8 430 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GOLGA8DPQ0D2H9 430 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 EFTUD2Q15029 972 aaKnown RBP eCLIP4.68□□□□□ -1.66
CHD9-201ENST00000219084 GRAMD1BQ3KR37 738 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 KBTBD12Q3ZCT8 623 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 BTNL9Q6UXG8 535 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CFAP36Q96G28 342 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 RNPC3Q96LT9 517 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 PIGSQ96S52 555 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ELAC2Q9BQ52 826 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 MAP3K20Q9NYL2 800 aaKnown RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 ADAMTS1Q9UHI8 967 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 VPS9D1Q9Y2B5 631 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ESYT2A0FGR8 921 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 K7ERI5 159 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 KRT8P05787 483 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ALAS1P13196 640 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 VPS41P49754 854 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 FXR2P51116 673 aaKnown RBP eCLIP4.68□□□□□ -1.662e-6■■■■□ 21.8
CHD9-201ENST00000219084 IRX5P78411 483 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 SLC7A5Q01650 507 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 MAPK6Q16659 721 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 ZNF667Q5HYK9 610 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 RDH13Q8NBN7 331 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 RDM1Q8NG50 284 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GTF3C2Q8WUA4 911 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 CAVIN3Q969G5 261 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CYTH2Q99418 400 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 DNAJC7Q99615 494 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CARD9Q9H257 536 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 VPS33BQ9H267 617 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 LRRC4Q9HBW1 653 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 TBC1D23Q9NUY8 699 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 APEX2Q9UBZ4 518 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 FBXO2Q9UK22 296 aaPredicted RBP4.68□□□□□ -1.66
CHD9-201ENST00000219084 ZDHHC9Q9Y397 364 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 TTLL3Q9Y4R7 772 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 NCKAP5LQ9HCH0 1330 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 DUOX1Q9NRD9 1551 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 CD163L1Q9NR16 1453 aa4.68□□□□□ -1.66
CHD9-201ENST00000219084 GTPBP10A4D1E9 387 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 SYCE1LA8MT33 242 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 DEAF1O75398 565 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 SNUPNO95149 360 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 RPSAP08865 295 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 NCF2P19878 526 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 PDCLQ13371 301 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 ZNF699Q32M78 642 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 KIAA1755Q5JYT7 1200 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 RTKN2Q8IZC4 609 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 RIN3Q8TB24 985 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PHF20Q9BVI0 1012 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CALN1Q9BXU9 219 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 OSBPL1AQ9BXW6 950 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 EPC1Q9H2F5 836 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 C10orf88Q9H8K7 445 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PKD2L2Q9NZM6 624 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 PPARGC1AQ9UBK2 798 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 CNOT8Q9UFF9 292 aaKnown RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 TTC26A0AVF1 554 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 IL18RAPO95256 599 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 EYA4O95677 639 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 APOA1P02647 267 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CDC27P30260 824 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 GFPT1Q06210 699 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 MTA1Q13330 715 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 TTC19Q6DKK2 380 aaPredicted RBP4.67□□□□□ -1.66
CHD9-201ENST00000219084 MOXD1Q6UVY6 613 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CCNJLQ8IV13 435 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 CPXCR1Q8N123 301 aa4.67□□□□□ -1.66
CHD9-201ENST00000219084 SMCR8Q8TEV9 937 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms