RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 VWCEQ96DN2 955 aa22.13■■□□□ 1.13
RHBDD3-201ENST00000216085 ACO2Q99798 780 aaKnown RBP22.13■■□□□ 1.13
RHBDD3-201ENST00000216085 TARS2Q9BW92 718 aaKnown RBP22.13■■□□□ 1.13
RHBDD3-201ENST00000216085 TOM1L1O75674 476 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 PRPF6O94906 941 aaKnown RBP22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 PIGRP01833 764 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 EPHB4P54760 987 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 DSC3Q14574 896 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 EPM2AIP1Q7L775 607 aaPredicted RBP22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 KIAA0895Q8NCT3 520 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 ZNF507Q8TCN5 953 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 TRAIPQ9BWF2 469 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 MAN1B1Q9UKM7 699 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 BMT2Q1RMZ1 405 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 ZNF568Q3ZCX4 644 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 SLFN12LQ6IEE8 588 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 CAVIN1Q6NZI2 390 aaKnown RBP22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 HS2ST1Q7LGA3 356 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 SCFD1Q8WVM8 642 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 RNPC3Q96LT9 517 aaKnown RBP22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 FGFBP2Q9BYJ0 223 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 PDZD7Q9H5P4 517 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 ANKFY1Q9P2R3 1169 aa22.12■■□□□ 1.13
RHBDD3-201ENST00000216085 ENPP3O14638 875 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 CLDN3O15551 220 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 BMP8BP34820 402 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 MPZL3Q6UWV2 235 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 GOLGA5Q8TBA6 731 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 GBP3Q9H0R5 595 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 FAM105AQ9NUU6 356 aa22.11■■□□□ 1.13
RHBDD3-201ENST00000216085 MGEA5O60502 916 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 STAG3L1P0CL83 205 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 WDR5P61964 334 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 SNRPFP62306 86 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 GUF1Q8N442 669 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 GLIS3Q8NEA6 775 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 CGNQ9P2M7 1197 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 LRFN2Q9ULH4 789 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 GDAQ9Y2T3 454 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 SLC4A7Q9Y6M7 1214 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 MICAL3Q7RTP6 2002 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 A0A0U1RQF3 1178 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 BIN1O00499 593 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 EDN1P05305 212 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 MORC3Q14149 939 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 NOLC1Q14978 699 aaKnown RBP eCLIP22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 KNOP1Q1ED39 458 aaKnown RBP22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 NELFCDQ8IXH7 590 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 PGBD4Q96DM1 585 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 SLC9A7Q96T83 725 aa22.1■■□□□ 1.13
RHBDD3-201ENST00000216085 NPTXRO95502 500 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 MCF2P10911 925 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 KCNA1Q09470 495 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 HSP90AA2PQ14568 343 aaPredicted RBP22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 TCTN1Q2MV58 587 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 COBLL1Q53SF7 1204 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 LINC01599Q8WXQ3 324 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 ELAC1Q9H777 363 aaKnown RBP22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 USP20Q9Y2K6 914 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 PCDHB7Q9Y5E2 793 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 PCDHB2Q9Y5E7 798 aa22.09■■□□□ 1.13
RHBDD3-201ENST00000216085 TTLL13PA6NNM8 815 aa22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 C9IYK1 514 aa22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 LETM1O95202 739 aaPredicted RBP22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 IBSPP21815 317 aaPredicted RBP22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 KYAT1Q16773 422 aa22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 RBM43Q6ZSC3 357 aaKnown RBP22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 CDR2LQ86X02 465 aaPredicted RBP22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 NPAS4Q8IUM7 802 aa22.08■■□□□ 1.13
RHBDD3-201ENST00000216085 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 PSMA7O14818 248 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 HOXA2O43364 376 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 EOMESO95936 686 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 PROZP22891 400 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 MCL1Q07820 350 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 ISM2Q6H9L7 571 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 SASS6Q6UVJ0 657 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 CHRDL2Q6WN34 429 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 RTN4RL1Q86UN2 441 aaPredicted RBP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 ECHDC2Q86YB7 292 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 PHOSPHO2Q8TCD6 241 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 POMGNT1Q8WZA1 660 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 PTPRHQ9HD43 1115 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 TYW1Q9NV66 732 aaKnown RBP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 TMEM161AQ9NX61 479 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 TMEM63CQ9P1W3 806 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 DACH1Q9UI36 760 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 MAPK8IP1Q9UQF2 711 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 KIAA0391O15091 583 aaKnown RBP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 ZNF623O75123 536 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 HARSP12081 509 aaKnown RBP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 SHHQ15465 462 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 EEF1DP3Q658K8 133 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 ARMCX5Q6P1M9 558 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 ZBTB33Q86T24 672 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 SMYD4Q8IYR2 804 aaPredicted RBP22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 TDHQ8IZJ6 230 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 RNF169Q8NCN4 708 aa22.07■■□□□ 1.12
RHBDD3-201ENST00000216085 MSTO1Q9BUK6 570 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms