RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PAK2Q13177 524 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 LBX2Q6XYB7 198 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 GADL1Q6ZQY3 521 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SND1Q7KZF4 910 aaKnown RBP eCLIP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 CYFIP1Q7L576 1253 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SLFN11Q7Z7L1 901 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 RIOX2Q8IUF8 465 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 FBXL13Q8NEE6 735 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ZSWIM2Q8NEG5 633 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 SLC35G2Q8TBE7 412 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 PLEKHO2Q8TD55 490 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 ACTRT1Q8TDG2 376 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 PARD3BQ8TEW8 1205 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 RUFY1Q96T51 708 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 KRT12Q99456 494 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 GOLPH3Q9H4A6 298 aa8.93□□□□□ -0.98
VAMP3-201ENST00000054666 DMGDHQ9UI17 866 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 NOC2LQ9Y3T9 749 aaKnown RBP8.93□□□□□ -0.98
VAMP3-201ENST00000054666 OTOFQ9HC10 1997 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 KIAA0391O15091 583 aaKnown RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 DLATP10515 647 aaKnown RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 AARSP49588 968 aaKnown RBP eCLIP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 SOX10P56693 466 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 RNASE9P60153 205 aaKnown RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 CYP24A1Q07973 514 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 PTPROQ16827 1216 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 C1orf220Q5T0J3 134 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 TREML2Q5T2D2 321 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 SEPT14Q6ZU15 432 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 NCAPG2Q86XI2 1143 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 RPUSD2Q8IZ73 545 aaKnown RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 HDAC7Q8WUI4 952 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 SLC7A3Q8WY07 619 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 FAM81BQ96LP2 452 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 FBXL18Q96ME1 805 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 GDAP1L1Q96MZ0 367 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 KIAA1586Q9HCI6 787 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 XPNPEP1Q9NQW7 623 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 ARHGAP28Q9P2N2 729 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 USP20Q9Y2K6 914 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 DIS3Q9Y2L1 958 aaKnown RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 ADGRA3Q8IWK6 1321 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 GOLGA6BA6NDN3 693 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 ZNF233A6NK53 670 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 CCDC188H7C350 402 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 BUB1BO60566 1050 aaPredicted RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 STBD1O95210 358 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 NF2P35240 595 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 GPC3P51654 580 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 NNTQ13423 1086 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 CLUL1Q15846 466 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 FAM160B1Q5W0V3 765 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 NT5DC3Q86UY8 548 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 METTL13Q8N6R0 699 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 PROCA1Q8NCQ7 364 aaPredicted RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 OLIG1Q8TAK6 271 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 DEPTORQ8TB45 409 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 SLC20A1Q8WUM9 679 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 EXOC4Q96A65 974 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 MFSD14AQ96MC6 490 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 FNBP1Q96RU3 617 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 THAP2Q9H0W7 228 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 OSGEPQ9NPF4 335 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 C1orf112Q9NSG2 853 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 RAB20Q9NX57 234 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 CTTNBP2NLQ9P2B4 639 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 FAN1Q9Y2M0 1017 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 COQ4Q9Y3A0 265 aa8.92□□□□□ -0.98
VAMP3-201ENST00000054666 POLR2AP24928 1970 aaKnown RBP8.92□□□□□ -0.98
VAMP3-201ENST00000054666 LRRIQ4A6NIV6 560 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 EXTL3O43909 919 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 RTN2O75298 545 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 UBA1P22314 1058 aaKnown RBP8.91□□□□□ -0.98
VAMP3-201ENST00000054666 RFC5P40937 340 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 NAMPTP43490 491 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 MRPS25P82663 173 aaKnown RBP8.91□□□□□ -0.98
VAMP3-201ENST00000054666 CNTN2Q02246 1040 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 GUCY2DQ02846 1103 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 NEDD9Q14511 834 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 SLC39A4Q6P5W5 647 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 ENOSF1Q7L5Y1 443 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 KLHL7Q8IXQ5 586 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 FAM71AQ8IYT1 594 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 EPS8L1Q8TE68 723 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 SHC3Q92529 594 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 CAVIN3Q969G5 261 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 HES6Q96HZ4 224 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 NAP1L3Q99457 506 aaPredicted RBP8.91□□□□□ -0.98
VAMP3-201ENST00000054666 FAM213AQ9BRX8 229 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 PAGR1Q9BTK6 254 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 SPATC1LQ9H0A9 340 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 EPB41L5Q9HCM4 733 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 ZCCHC17Q9NP64 241 aaKnown RBP8.91□□□□□ -0.98
VAMP3-201ENST00000054666 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.91□□□□□ -0.982e-6■■■■■ 149.1
VAMP3-201ENST00000054666 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 GDF3Q9NR23 364 aa8.91□□□□□ -0.98
VAMP3-201ENST00000054666 MAFBQ9Y5Q3 323 aaPredicted RBP8.91□□□□□ -0.98
VAMP3-201ENST00000054666 SYNGAP1Q96PV0 1343 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms