RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Arhgef26D3YYY8 869 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Spryd3E9Q9B3 442 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Rpl13P47963 211 aaKnown RBP20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Rnf19aP50636 840 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Ephb4P54761 987 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Fam183bQ5NC57 135 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 ChpfQ6IQX7 774 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Gpbp1l1Q6NZP2 473 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 PoliQ6R3M4 717 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Cc2d1bQ8BRN9 848 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Neu4Q8BZL1 478 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Smoc2Q8CD91 447 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 March8Q9DBD2 286 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Gm17535J3KMR8 224 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Adam15O88839 864 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Nr2f2P43135 414 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Tbx3P70324 741 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Dhx37Q6NZL1 1150 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Olfr1046Q7TR79 316 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Gtf2a2Q80ZM7 109 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Sept8Q8CHH9 429 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Ca12Q8CI85 354 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Ago2Q8CJG0 860 aaKnown RBP20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Castor1Q9CWQ8 331 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Thap2Q9D305 217 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Tube1Q9D6T1 475 aa20.48■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Gm5934D3Z4U6 212 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Gpr25P0C5I1 358 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Lamp2P17047 415 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 GcP21614 476 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Nom1Q3UFM5 854 aaKnown RBP20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Slc7a6osQ7TPE5 306 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Olfr392Q7TRX6 312 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 OgtQ8CGY8 1046 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Bbs7Q8K2G4 715 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Usp29Q9ES63 869 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Tlr5Q9JLF7 859 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Kank3Q9Z1P7 791 aa20.47■□□□□ 0.87
Scn1b-203ENSMUST00000211945 March10E9PX79 788 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Cetn3O35648 167 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 GpiP06745 558 aaKnown RBP20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Adssl1P28650 457 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 PfkmP47857 780 aaKnown RBP20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 NcanP55066 1268 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Scarf2P59222 833 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Ccdc162pQ0VG85 912 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Entpd7Q3TCT4 606 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 PomkQ3TUA9 349 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Cdc37Q61081 379 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Ankfy1Q810B6 1169 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Slc2a12Q8BFW9 622 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Armcx3Q8BHS6 379 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Ccdc169Q8BXX9 214 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Eml3Q8VC03 897 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Tlr6Q9EPW9 795 aa20.46■□□□□ 0.87
Scn1b-203ENSMUST00000211945 Fpr-rs4A4FUQ5 323 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 1700064H15RikD3Z4D4 81 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Trim30bE9PVL6 203 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Tnfrsf11aO35305 625 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Zc3h18Q0P678 948 aaKnown RBP20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Znf579Q80VM4 562 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Smarcal1Q8BJL0 910 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Fbxl5Q8C2S5 690 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 SucoQ8C341 1250 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Smg8Q8VE18 991 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Lpin2Q99PI5 893 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Chd1lQ9CXF7 900 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 PrameQ9D4Z5 464 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Cpsf3Q9QXK7 684 aa20.45■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Rp1l1Q8CGM2 1859 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Olfr456B2RT27 312 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Xpnpep3B7ZMP1 506 aaKnown RBP20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Gm10801F7C7Q0 168 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Gm3739L7N296 216 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 EgfP01132 1217 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 MybP06876 636 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Mfsd14aP70187 490 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 DsppP97399 934 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 DmwdQ08274 665 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Znf280dQ68FE8 974 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Mrgprb8Q7TN51 330 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Q8BGN9 141 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Gprc5aQ8BHL4 356 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Tsen34Q8BMZ5 316 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Ttc39bQ8BYY4 617 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Kct2Q8K201 259 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 DutQ8VCG1 200 aaKnown RBP20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Olfr458Q8VF80 313 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Olfr457Q8VGP5 313 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Mfap3Q922T2 349 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Ppp2r2dQ925E7 453 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Clp1Q99LI9 425 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Cfap45Q9D9U9 551 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Vmn1r65Q9EPS7 332 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Krt17Q9QWL7 433 aa20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Ttc3O88196 1979 aaKnown RBP20.44■□□□□ 0.86
Scn1b-203ENSMUST00000211945 1700017N19RikA0A087WPJ1 469 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Zscan25B2RX31 543 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Fam184aE9PW83 1143 aa20.43■□□□□ 0.86
Scn1b-203ENSMUST00000211945 Casp14O89094 257 aa20.43■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms