RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Fdxacb1Q3UY23 622 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ppp1r13bQ62415 1087 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Msantd2Q6NZR2 559 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Zic5Q7TQ40 622 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Siglec10Q80ZE3 688 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Kirrel3Q8BR86 778 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Reep2Q8VCD6 254 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gfpt2Q9Z2Z9 682 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Serpinb6cW4VSP4 379 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gm28360A0A087WR25 190 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Btbd18A0A0A6YY25 723 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Slc6a16A0A1L1SR47 742 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Skint3A7TZF0 458 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Fam129cD3YZB0 591 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Magea4F2Z493 315 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Eftud2O08810 971 aaKnown RBP11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Guca2bO09051 106 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Trappc3O55013 180 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tp53P02340 387 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Akr1b8P45377 316 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Hoxc13P50207 328 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Psmc4P54775 418 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Sox10Q04888 466 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Nhej1Q3KNJ2 295 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Smcr8Q3UMB5 935 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Zbtb7bQ64321 544 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Usp17leQ7M764 540 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Bank1Q80VH0 783 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tspan18Q80WR1 248 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 C2cd2lQ80X80 706 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Nipa1Q8BHK1 323 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Anapc5Q8BTZ4 740 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Kiaa0391Q8JZY4 584 aaKnown RBP11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 PdxkQ8K183 312 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 IntS13Q8QZV7 732 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cbwd1Q8VEH6 393 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Rnf34Q99KR6 376 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 YwhabQ9CQV8 246 aaKnown RBP11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Atp6v1g1Q9CR51 118 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Golph3Q9CRA5 298 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Usp14Q9JMA1 493 aaKnown RBP11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Atp6v1g2Q9WTT4 118 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Phf2Q9WTU0 1096 aa11.3□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Taf4bG5E8Z2 855 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gm10436L7N1Y3 520 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ctnnd1P30999 938 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 NyxP83503 476 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Epas1P97481 874 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 HmmrQ00547 794 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Trim80Q3V061 624 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Krt15Q61414 452 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gpd2Q64521 727 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Dync1li2Q6PDL0 492 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tbc1d22bQ80VE5 505 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 ClasrpQ8CFC7 668 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Stard7Q8R1R3 373 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Bzw2Q91VK1 419 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cd2bp2Q9CWK3 342 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Jph2Q9ET78 696 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tlr2Q9QUN7 784 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Gm45261A0A1B0GSP6 197 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 TazI7HJS2 263 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cyth3O08967 399 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cst8P32766 142 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 GckP52792 465 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Polr2fP61219 127 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Trmt1Q3TX08 663 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Map3k9Q3U1V8 1077 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Pacs2Q3V3Q7 862 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Psd2Q6P1I6 770 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Sh3d21Q7TSG5 549 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Calml4Q91WQ9 153 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 HlcsQ920N2 722 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tmco1Q921L3 188 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ino80bQ99PT3 375 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Npm3Q9CPP0 175 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cfap57Q9D180 1249 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ccdc130Q9D516 385 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ascc1Q9D8Z1 356 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Smco2Q9DA21 347 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Cse1lQ9ERK4 971 aaKnown RBP11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Lztfl1Q9JHQ5 299 aa11.29□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Odf2A3KGV1 830 aaKnown RBP11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Sbf2E9PXF8 1872 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 DtnbO70585 659 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 XlrP05531 208 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Yy1Q00899 414 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Rufy4Q3TYX8 563 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 E2f8Q58FA4 860 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Hif1aQ61221 836 aaKnown RBP11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Dlg4Q62108 724 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ces1eQ64176 562 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Garem2Q6PAJ3 880 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Fam210aQ8BGY7 273 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tarsl2Q8BLY2 790 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Parp10Q8CIE4 960 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Slc12a8Q8VI23 705 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 DaglbQ91WC9 669 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Ascc2Q91WR3 749 aa11.28□□□□□ -0.6
Ptpre-208ENSMUST00000211788 Tex9Q9D845 387 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms