RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Gucy1b3O54865 620 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Fmr1P35922 614 aaKnown RBP14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Gm1587Q3UT80 123 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 DeptorQ570Y9 409 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Cyp3a11Q64459 504 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Q8BGD0 127 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Hsdl1Q8BTX9 330 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Sulf1Q8K007 870 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Atp6v0a4Q920R6 833 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Ube2sQ921J4 223 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Adam22Q9R1V6 904 aa14.36□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Slc35g2D3YVE8 412 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Gm4297D3YWB7 211 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Clca3bE9PUL3 1044 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Gm4841E9QAA8 417 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Cyp2c68K7N6C2 491 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Folh1O35409 752 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Mucl2P02815 138 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Usp4P35123 962 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Evi5P97366 809 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Rgs9bpQ148R9 237 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Tatdn3Q3U1C6 294 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Sh3gl2Q62420 352 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 IgflQ6B9Z0 140 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Slc4a7Q8BTY2 1034 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Fam228aQ8CDW1 299 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 D630039A03RikQ8K0M7 236 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Glis2Q8VDL9 521 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Satl1Q9D5N8 744 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Znf354bQ9QXT9 601 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Kcnq2Q9Z351 759 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Polr2aP08775 1970 aaKnown RBP14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Efna5O08543 228 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Cpsf2O35218 782 aaKnown RBP14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Clk2O35491 499 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 P01734 135 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Xrcc5P27641 732 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Syt2P46097 422 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Grm1P97772 1199 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Zmym1Q3TJB1 983 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Rnf40Q3U319 1001 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Tax1bp1Q3UKC1 814 aaKnown RBP14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 E2f5Q61502 335 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Frmd5Q6P5H6 517 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Moxd2Q7TT41 619 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Q8BGN9 141 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Nop53Q8BK35 484 aaKnown RBP14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Kat5Q8CHK4 513 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Ago2Q8CJG0 860 aaKnown RBP14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Ap3m2Q8R2R9 418 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Scrn2Q8VCA8 425 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Pcdha2Q91Y17 948 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Slc12a9Q99MR3 914 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Golph3Q9CRA5 298 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Rnaseh2aQ9CWY8 301 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Stx17Q9D0I4 301 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 PrameQ9D4Z5 464 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Pdk2Q9JK42 407 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Fzd9Q9R216 592 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Tnfsf13bQ9WU72 309 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Syngap1F6SEU4 1340 aa14.35□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 PhipQ8VDD9 1821 aaKnown RBP14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 2210011C24RikA0A087WQ89 206 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Lrrc74aA0A1Y7VMD6 494 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Tcp10bE9PYJ0 438 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 ZfxP17012 799 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Trap1aP19473 224 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 ProcP33587 460 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Ighmbp2P40694 993 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Hsd17b1P51656 344 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 MafP54843 370 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 BC051142Q3V0M8 400 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 EsrrbQ61539 433 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Tll1Q62381 1013 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Rnf139Q7TMV1 668 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 AdalQ80SY6 360 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Ttc22Q8C159 568 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Fam83aQ8K2P2 436 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Tbx22Q8K402 517 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Mrpl58Q8R035 206 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Znf830Q8R1N0 363 aaKnown RBP14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Xpo5Q924C1 1204 aaKnown RBP14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Mov10l1Q99MV5 1187 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Grk1Q9WVL4 564 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Pds5aQ6A026 1332 aa14.34□□□□□ -0.11
Pdlim5-208ENSMUST00000196220 Atp2c2A7L9Z8 944 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 4933406M09RikG3XA12 479 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Prkg1P0C605 671 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Mov10P23249 1004 aaKnown RBP14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Lta4hP24527 611 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Mybl1P51960 751 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Opa1P58281 960 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Acsbg2Q2XU92 667 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Gm10392Q3V3I3 114 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Rhox12Q4TU81 186 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Ddr2Q62371 854 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Anks6Q6GQX6 883 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Ece2Q80Z60 881 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Ublcp1Q8BGR9 318 aa14.33□□□□□ -0.12
Pdlim5-208ENSMUST00000196220 Tcaf1Q8BNE1 924 aa14.33□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms