RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Brip1Q5SXJ3 1174 aa12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 Magea3Q6T340 320 aa12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 Depdc1bQ8BH88 529 aa12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 MslnlQ8C160 685 aa12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 Zcchc8Q9CYA6 709 aaKnown RBP12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 Xab2Q9DCD2 855 aaKnown RBP12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 Rfwd2Q9R1A8 733 aaKnown RBP12.13□□□□□ -0.47
Lig1-211ENSMUST00000177588 Mageb2A2AHM0 380 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Sash1P59808 1230 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Fgfr4Q03142 799 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Frmd8Q3UFK8 466 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Six1Q62231 284 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Slc14a1Q8VHL0 384 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Coa7Q921H9 231 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Golga1Q9CW79 758 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Ssr1Q9CY50 286 aaKnown RBP12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Q9DA42 136 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Cpne8Q9DC53 577 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Rabgef1Q9JM13 491 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Casp14O89094 257 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Hoxa13Q62424 386 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Plk4Q64702 925 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Zswim5Q80TC6 1188 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Apol9bQ8C7I4 310 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Ints9Q8K114 658 aaKnown RBP12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Apbb1ipQ8R5A3 670 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Apol9aQ8VDU3 310 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Tti1Q91V83 1085 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 NptxrQ99J85 493 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Znf654Q9DAU9 571 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Cpb2Q9JHH6 422 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Smok2bQ9QYZ3 484 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Smok2aQ9QYZ6 504 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Pde4aO89084 844 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 FosP01101 380 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Pik3r1P26450 724 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Lrch1P62046 709 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Tmem120bQ3TA38 339 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Tas2r134Q7TQB0 298 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Tmem39bQ810L4 492 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Nudt12Q9DCN1 462 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Klrc2Q9WTJ9 238 aa12.12□□□□□ -0.47
Lig1-211ENSMUST00000177588 Itgb4A2A863 1818 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Bpifb9bA2AJD1 591 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 6030498E09RikB1AX85 169 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Cdk14O35495 469 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Ctnnal1O88327 731 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Art2aP17981 287 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Slc1a1P51906 523 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Mmp14P53690 582 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Q3TTJ4 293 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 OgdhQ60597 1023 aaKnown RBP12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Dlg4Q62108 724 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Ugt1a9Q62452 528 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Zbtb7bQ64321 544 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Klra3Q64329 266 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Bpifb9aQ80XI7 591 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Fbxl5Q8C2S5 690 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Riox2Q8CD15 465 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Dcaf8Q8N7N5 591 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Azi2Q9QYP6 405 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Glt1d1A4FUP9 346 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Kcnk16G5E845 292 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Pde8aO88502 823 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Cd68P31996 326 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Bpifb5Q3UQ05 490 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Miga1Q4QQM5 600 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Kcnt1Q6ZPR4 1224 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Fbxo11Q7TPD1 930 aaKnown RBP12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 TbataQ7TSD4 393 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Ms4a5Q810P8 197 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Mageb18Q8BQR7 327 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Camkk2Q8C078 588 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Inpp5fQ8CDA1 1132 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Actl9Q8CG27 415 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 CrygnQ8VHL5 183 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Trex1Q91XB0 314 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Igf2bp3Q9CPN8 579 aaKnown RBP12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Asb11Q9CQ31 323 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Pabpc6Q9D4E6 643 aaKnown RBP12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Ccdc124Q9D8X2 217 aaKnown RBP12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Myh11O08638 1972 aa12.11□□□□□ -0.47
Lig1-211ENSMUST00000177588 Flot1O08917 428 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Klrb1Q0ZUP1 214 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Trim80Q3V061 624 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 IgflQ6B9Z0 140 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Brd2Q7JJ13 798 aaKnown RBP12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Rusc1Q8BG26 893 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Scfd1Q8BRF7 639 aaKnown RBP12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Naa25Q8BWZ3 972 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 CnstQ8CBC4 711 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Mill1Q8HWE7 395 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Shtn1Q8K2Q9 631 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Znf830Q8R1N0 363 aaKnown RBP12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 SarnpQ9D1J3 210 aaKnown RBP12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 IqcdQ9D3V1 458 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Krt17Q9QWL7 433 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Zc3h7bF8VPP8 982 aaKnown RBP12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Wnt10bP48614 389 aa12.1□□□□□ -0.47
Lig1-211ENSMUST00000177588 Cops2P61202 443 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms