RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 ItgadQ3V0T4 1168 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Mks1Q5SW45 561 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Vav2Q60992 868 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tfe3Q64092 572 aaKnown RBP12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ssxb10Q6XAR7 170 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Scfd1Q8BRF7 639 aaKnown RBP12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 AopepQ8BXQ6 817 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 CntrobQ8CB62 887 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 AdigQ8R400 80 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Plagl2Q925T4 496 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tmem192Q9CXT7 266 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Eif4enif1Q9EST3 983 aaKnown RBP12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Pabpc1lA2A5N3 607 aaKnown RBP12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Ccdc153P0C7Q1 202 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Cyp2e1Q05421 493 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Gm3414Q3TNU4 584 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tmem117Q8BH18 514 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Serpina3bQ8BYY9 420 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Tdrd7Q8K1H1 1086 aaKnown RBP12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Nudcd3Q8R1N4 363 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Zfyve16Q80U44 1528 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Igsf9bE9PZ19 1328 aa12.4□□□□□ -0.42
Ndc1-204ENSMUST00000139560 Arl4cP61208 192 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 NfixP70257 488 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Kcnb1Q03717 857 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Catsper3Q80W99 395 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ano4Q8C5H1 955 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Btbd6Q8K2J9 488 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ppp4r1Q8K2V1 951 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fkbp6Q91XW8 327 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 CtsqQ91ZF4 343 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Serpinb3bQ9D1Q5 387 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Uchl3Q9JKB1 230 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gadd45gQ9Z111 159 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fem1bQ9Z2G0 627 aa12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dnmt1P13864 1620 aaKnown RBP12.4□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ino80Q6ZPV2 1559 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Serpina16D3Z660 418 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Slc27a2O35488 620 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ifnb1P01575 182 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 9130409I23RikQ3TS87 320 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fhod1Q6P9Q4 1197 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tas2r109Q7M707 316 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 LdhdQ7TNG8 484 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Lca5Q80ST9 704 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 RimklbQ80WS1 387 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ddhd1Q80YA3 547 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Abcg3Q99P81 650 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 JcadQ5DTX6 1320 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Apol7bB1AQP7 369 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nfx1B1AY10 1114 aaKnown RBP12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Arpp19P56212 112 aaKnown RBP12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atp13a5Q3TYU2 1216 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Prmt9Q3U3W5 846 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Apol7eQ3UZ24 369 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 CpQ61147 1061 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gprasp2Q8BUY8 826 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ppp1r14cQ8R4S0 164 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Olfr390Q8VEZ7 311 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 HnmtQ91VF2 295 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Syf2Q9D198 242 aaKnown RBP12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Usp31E9Q6Y8 1344 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Fndc1E9Q043 1732 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cyp2c69E9PXC3 491 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 ProcP33587 460 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Alox15P39654 663 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Cyp2c40P56657 491 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Sycp3P70281 254 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Grm1P97772 1199 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Lmntd2Q0VET5 664 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Trmt1Q3TX08 663 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tpp2Q64514 1262 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Map3k10Q66L42 940 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Antxr2Q6DFX2 487 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Atg16l1Q8C0J2 607 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pglyrp2Q8VCS0 530 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tdrd3Q91W18 743 aaKnown RBP12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nek8Q91ZR4 698 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 MlklQ9D2Y4 472 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ccdc70Q9D9B0 223 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 IkbipQ9DBZ1 373 aa12.39□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Zc3h7bF8VPP8 982 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 ZfaP23607 742 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Pik3r1P26450 724 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ceacam5Q3UKK2 947 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tnni3kQ5GIG6 834 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Mapk4Q6P5G0 583 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dcaf15Q6PFH3 600 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Mmgt1Q8K273 131 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 RnpepQ8VCT3 650 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Tesk2Q8VCT9 570 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Chordc1Q9D1P4 331 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ddx20Q9JJY4 825 aaKnown RBP12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Anapc7Q9WVM3 565 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Hsf3D0VYS2 492 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Aff1O88573 1216 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ptk2P34152 1090 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Kcnn2P58390 839 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rnf168Q80XJ2 565 aa12.38□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Slc7a14Q8BXR1 771 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms