RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Hdac10Q6P3E7 666 aa13.15□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Mtss1Q8R1S4 759 aa13.15□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ccdc103Q9D9P2 237 aa13.15□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cul3Q9JLV5 768 aa13.15□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gm10639E9Q6L7 222 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gsta2P10648 222 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Otub1Q7TQI3 271 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Nlrp4aQ8BU40 982 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 SgczQ8BX51 311 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Trim59Q922Y2 403 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Rgs10Q9CQE5 181 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ndufa13Q9ERS2 144 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cdkl2Q9QUK0 568 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Nid2O88322 1403 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Sik3Q6P4S6 1311 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Lig1P37913 916 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Hddc2Q3SXD3 199 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ankrd42Q3V096 527 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Epha7Q61772 998 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gucy2gQ6TL19 1100 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Fam49aQ8BHZ0 323 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Haus7Q8BKT8 364 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Slc38a7Q8BWH0 463 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Fbxw7Q8VBV4 629 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Pcdhb11Q91UZ8 797 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Akr1c14Q91WT7 323 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Vwa5aQ99KC8 793 aaKnown RBP13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 C1qtnf1Q9QXP7 281 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Atp11cQ9QZW0 1129 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Eya4Q9Z191 616 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Nfx1B1AY10 1114 aaKnown RBP13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gm8897L7N294 181 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 RetsatQ64FW2 609 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cyp4x1Q6A152 507 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Wdr35Q8BND3 1181 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Galnt5Q8C102 930 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gpc5Q8CAL5 572 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Stard7Q8R1R3 373 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Trpm8Q8R4D5 1104 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cadm1Q8R5M8 456 aaKnown RBP13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ppp1r16bQ8VHQ3 568 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Polr3fQ921X6 316 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Dhx30Q99PU8 1217 aaKnown RBP13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gm3187M0QWW3 260 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Kcna1P16388 495 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ush1gQ80T11 461 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ccdc151Q8BSN3 593 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Eno4Q8C042 619 aa13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Q9D937 123 aaKnown RBP13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Abt1Q9QYL7 269 aaKnown RBP13.14□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cdk12Q14AX6 1484 aaKnown RBP13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Lzts3A2AHG0 700 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Vmn2r121A2BE32 847 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Serpinb3cA2RSF9 386 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Lrrc38A2VDH3 298 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Farp1F8VPU2 1048 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Efna5O08543 228 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Casp12O08736 419 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cdh2P15116 906 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Lmntd2Q0VET5 664 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Pid1Q3UBG2 217 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ankrd34bQ3UUF8 508 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Maged2Q9ER67 616 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Lamc1P02468 1607 aaKnown RBP13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Slc35g2D3YVE8 412 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 4930444G20RikD3Z741 495 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Klc2O88448 599 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Snap25P60879 206 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Casp4P70343 373 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Carmil2Q3V3V9 1296 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 SpdyaQ5IBH7 310 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Tcp10aQ80W76 438 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Rmnd1Q8CI78 450 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Micu3Q9CTY5 523 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 CinpQ9D0V8 212 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Serpinb6cW4VSP4 379 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gm8922F6XVS9 199 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Rnf10Q3UIW5 804 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 FntaQ61239 377 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Acot5Q6Q2Z6 421 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Fam102aQ78T81 392 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Trip10Q8CJ53 603 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Lrrc14Q8VC16 493 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Pabpc6Q9D4E6 643 aaKnown RBP13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ubxn8Q9QZ49 277 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Mtmr1Q9Z2C4 669 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Grin2dQ03391 1323 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Cyp2c23E9Q5K4 494 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Zfp788E9Q980 884 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gm17615E9Q9P2 165 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 PorP37040 678 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Rbbp7Q60973 425 aaKnown RBP13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Trim65Q8BFW4 522 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Kbtbd4Q8R179 534 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Vmn1r214Q8R279 367 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Trim12aQ99PQ1 284 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Rps6ka4Q9Z2B9 773 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Ttll10A4Q9F3 704 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Herc3A6H6S0 1050 aa13.13□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Scg3P47867 471 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms