RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Bst2Q8R2Q8 172 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cd248Q91V98 765 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rabgef1Q9JM13 491 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Grk1Q9WVL4 564 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Patl2A2ARM1 529 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pagr1bF6V0H0 108 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Zfy1P10925 782 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pik3r1P26450 724 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ephb2P54763 986 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tmem120bQ3TA38 339 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Atp13a3Q5XF89 1219 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Senp6Q6P7W0 1132 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 GmipQ6PGG2 971 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Calhm6Q8C9E8 313 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Atp2a1Q8R429 994 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cpa5Q8R4H4 436 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Fkbp6Q91XW8 327 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pagr1aQ99L02 253 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Xab2Q9DCD2 855 aaKnown RBP12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nup50Q9JIH2 466 aaKnown RBP12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Txnrd2Q9JLT4 524 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Zfp266E9Q2S7 604 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Cyth3O08967 399 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Nrg3O35181 713 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Slc16a2O70324 545 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Calb1P12658 261 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 PrphP15331 475 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Oprl1P35377 367 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ugt1a2P70691 533 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ptprn2P80560 1001 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Sfi1Q3UZY0 1216 aaKnown RBP12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ccdc84Q4VA36 332 aaKnown RBP12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Peg10Q7TN75 958 aaKnown RBP12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Q8BGN9 141 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tesk2Q8VCT9 570 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Sdr42e1Q9D665 394 aa12.41□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Znf804aA2AKY4 1200 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Casq2O09161 415 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 RcvrnP34057 202 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Wdr41Q3UDP0 460 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ksr1Q61097 873 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Tmem132dQ76HP3 1097 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Stkld1Q80YS9 662 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Ubap1Q8BH48 502 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Kctd6Q8BNL5 237 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rsad2Q8CBB9 362 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Spns2Q91VM4 549 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 WaslQ91YD9 501 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Usp11Q99K46 921 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 4933406M09RikG3XA12 479 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Usp17ldG5E8G2 545 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Usp17lcG5E8I7 545 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 FosP01101 380 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 MycnP03966 462 aaKnown RBP12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 CnpP16330 420 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Pde6bP23440 856 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Wfs1P56695 890 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Smarcad1Q04692 1021 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Sox10Q04888 466 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 GmncQ3URY2 333 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Taok1Q5F2E8 1001 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Klra6Q60653 266 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Q9DAQ4 598 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 MesdQ9ERE7 224 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 ErmapQ9JLN5 566 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Adam22Q9R1V6 904 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Rnf103Q9R1W3 683 aa12.4□□□□□ -0.42
Col9a1-202ENSMUST00000088349 Col11a2Q64739 1736 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Adam7O35227 789 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Eif3dO70194 548 aaKnown RBP12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Chrm1P12657 460 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Xrcc5P27641 732 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Syt2P46097 422 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Adcy7P51829 1099 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 PctpP53808 214 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 CcnjlQ5SRT8 387 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Krt77Q6IFZ6 572 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Dnajc8Q6NZB0 253 aaKnown RBP12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 PreplQ8C167 725 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Defb15Q8R2I5 79 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Borcs6Q9D6W8 360 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gtf2h1Q9DBA9 547 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ggt5Q9Z2A9 573 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Olfr552E9Q545 317 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Prkg1P0C605 671 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Lrch1P62046 709 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Syne3Q4FZC9 975 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Ppp2r5eQ61151 467 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Nlrp4fQ66X05 959 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Sec23ipQ6NZC7 998 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 PrimpolQ6P1E7 537 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Slc7a6osQ7TPE5 306 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Pih1h3bQ8C6P5 218 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Actl9Q8CG27 415 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Gprc5cQ8K3J9 440 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Igf2bp3Q9CPN8 579 aaKnown RBP12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Chordc1Q9D1P4 331 aaKnown RBP12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Klrc2Q9WTJ9 238 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 Nup188Q6ZQH8 1759 aa12.39□□□□□ -0.43
Col9a1-202ENSMUST00000088349 VirmaA2AIV2 1811 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms