RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rev1Q920Q2 1249 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Katnal2Q9D3R6 539 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 HemgnQ9ERZ0 503 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Trpc4apQ9JLV2 797 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Usp14Q9JMA1 493 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pck1Q9Z2V4 622 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Myh10Q61879 1976 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pcdh11xF6ZNL5 1338 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm43738A0A0G2JEA5 862 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccdc175E9PVB3 822 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ap1arE9PYF7 298 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 CenpaO35216 134 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Map3k7clP58500 142 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 SbdsP70122 250 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ntrk1Q3UFB7 799 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cog7Q3UM29 770 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tars2Q3UQ84 723 aaKnown RBP10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 ItgaeQ60677 1167 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tnfaip2Q61333 691 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Znf148Q61624 794 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sec23ipQ6NZC7 998 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 SpidrQ8BGX7 933 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Csgalnact2Q8C1F4 542 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Serpinb13Q8CDC0 389 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q922C1 641 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gimap4Q99JY3 219 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Spesp1Q9D5A0 399 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Phtf1Q9QZ09 761 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mpp2Q9WV34 552 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tll2Q9WVM6 1012 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam71aB7XG49 585 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cyp3a59D3Z2W7 503 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Prl2c3P04768 224 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccnb1P24860 430 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Xrcc5P27641 732 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cct8P42932 548 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Serpinb5P70124 375 aaKnown RBP10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nlrp1aQ2LKU9 1182 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Hace1Q3U0D9 909 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 WhammQ571B6 793 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mief2Q5NCS9 454 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 N6amt1Q6SKR2 214 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccdc25Q78PG9 208 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nox1Q8CIZ9 591 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sirt2Q8VDQ8 389 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 IrgqQ8VIM9 583 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Grhl1Q921D9 618 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ndel1Q9ERR1 345 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Slc13a1Q9JHI4 594 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lgr5Q9Z1P4 907 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Kdm3aQ6PCM1 1323 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Abcc10Q8R4P9 1501 aa10.37□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Zfp646Q6NV66 1788 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm8257E9Q8R3 264 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sult3a2G5E904 293 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lipo1J3QME6 396 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm6614M0QWR8 670 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Psmd7P26516 321 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Scg2Q03517 617 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nqo1Q64669 274 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fastkd1Q6DI86 829 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 SnphQ80U23 495 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Impg2Q80XH2 1243 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pdzph1Q8BGR1 1238 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nlrp4bQ8C6J9 863 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dis3l2Q8CI75 870 aaKnown RBP10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Hacd3Q8K2C9 362 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ciapin1Q8WTY4 309 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fastkd2Q922E6 689 aaKnown RBP10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ppil4Q9CXG3 492 aaKnown RBP10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ropn1Q9ESG2 212 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Smok2bQ9QYZ3 484 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Smok2aQ9QYZ6 504 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tbc1d8bA3KGB4 1114 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Zfp174B9EJW5 407 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dnmt3aO88508 908 aaKnown RBP10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Adam15O88839 864 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rad23bP54728 416 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rbm46P86049 533 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gbp8Q2V6D6 525 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam117bQ3U3E2 584 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lrrc55Q3UY51 311 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm732Q3V0P9 516 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Akap4Q60662 849 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Als2clQ60I26 952 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pacsin1Q61644 441 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Snx19Q6P4T1 997 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ttyh3Q6P5F7 524 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Adat2Q6P6J0 191 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q6PD19 689 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 GypcQ78HU7 95 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pcdha10Q91Y20 946 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ndfip2Q91ZP6 311 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Smtnl1Q99LM3 459 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam136aQ9CR98 138 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 MymkQ9D1N4 221 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Terb2Q9D494 218 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ap2b1Q9DBG3 937 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Arpp21Q9DCB4 807 aa10.36□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rgs1Q9JL25 209 aa10.36□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms