RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Ddx18Q8K363 660 aaKnown RBP12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm21149A0A0G2JFY7 255 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Speer4cG3UXD1 256 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm17019K7N6W5 255 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ess2O70279 479 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gsdmc4Q3TR54 480 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tnfaip2Q61333 691 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm7247Q6UY52 187 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm9758Q80ZT2 255 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Thumpd2Q9CZB3 528 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gipc2Q9Z2H7 314 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Lmtk2Q3TYD6 1471 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Mageb2A2AHM0 380 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Map2k2Q63932 401 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rd3Q8BRE0 195 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 SgczQ8BX51 311 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Nt5c3aQ9D020 331 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Thap2Q9D305 217 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Fthl17aQ9DAX0 182 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm5795E9PZN8 263 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Serpina3kP07759 418 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Nek1P51954 1203 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Slc16a1P53986 493 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gjb6P70689 261 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ccdc51Q3URS9 406 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Fbxo18Q8K2I9 1042 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 RpainQ9CWY9 219 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 MrrfQ9D6S7 262 aaKnown RBP12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Dctn3Q9Z0Y1 186 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pla2r1Q62028 1487 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 1700016G14RikA0A286YCZ6 238 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cdc27A2A6Q5 825 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 6030498E09RikB1AX85 169 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Akap10O88845 662 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 TfamP40630 243 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ncoa4Q5U4H9 625 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 CybbQ61093 570 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Bcap31Q61335 245 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pcdhb14Q6PB90 796 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rmdn2Q8BSE0 410 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cdk8Q8R3L8 464 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Lrrc14Q8VC16 493 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pcdha11Q91Y19 950 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rassf7Q9DD19 359 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tmed8Q3UHI4 326 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ppp1r13lQ5I1X5 824 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ano5Q75UR0 904 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Pus7lQ8CE46 702 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 MlphQ91V27 590 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Peg12Q9WVA7 283 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm5592Q3V0A6 857 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Trim28Q62318 834 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tmem132cQ8CEF9 1099 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Swi5Q8K3D3 89 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tomm70Q9CZW5 611 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Dynll2Q9D0M5 89 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tmem206Q9D771 350 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 Col1a2Q01149 1372 aa12.6□□□□□ -0.39
Trim56-201ENSMUST00000054384 TnnQ80Z71 1560 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm8994E9PV04 411 aaKnown RBP12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Akap14Q3V0I7 536 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm5414Q6IFZ8 552 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 NelfcdQ922L6 591 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Fam102aQ78T81 392 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Dcun1d2Q8BZJ7 259 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 CrotQ9DC50 612 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Krt17Q9QWL7 433 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Clrn2B2RVW2 232 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Klc2O88448 599 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Kcna3P16390 528 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cyp7b1Q60991 507 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Irak1Q62406 710 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm5622Q810Q0 167 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 StrbpQ91WM1 672 aaKnown RBP12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Hspa1aQ61696 641 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 B3galnt2Q8BG28 504 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Upb1Q8VC97 393 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 GatbQ99JT1 557 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Card9A2AIV8 536 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tcp10bE9PYJ0 438 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Alppl2P24823 529 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Slc7a1Q09143 622 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm45261A0A1B0GSP6 197 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Gm382B1AXN3 1250 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Morc3F7BJB9 942 aaKnown RBP12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Dsg3O35902 993 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Akap4Q60662 849 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Calhm6Q8C9E8 313 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Epc1Q8C9X6 813 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 PdhbQ9D051 359 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Styxl1Q9DAR2 321 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tbk1Q9WUN2 729 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Plch2A2AP18 1501 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Klc1O88447 541 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Tsc22d1P62500 1077 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Xlr3aQ60595 226 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Rbm15bQ6PHZ5 887 aaKnown RBP12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Ush1gQ80T11 461 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Apol9bQ8C7I4 310 aa12.59□□□□□ -0.39
Trim56-201ENSMUST00000054384 Cnot3Q8K0V4 751 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms