RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Usp15Q8R5H1 981 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Abcg8Q9DBM0 673 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Sall1Q9ER74 1322 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Kcnk16G5E845 292 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trappc3O55013 180 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Surf6P70279 355 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 InhbaQ04998 424 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tcf12Q61286 706 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nuak1Q641K5 658 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Dusp4Q8BFV3 398 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fmnl1Q9JL26 1094 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Abhd2Q9QXM0 425 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Dsg3O35902 993 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 GclcP97494 637 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Lrriq3Q14DL3 633 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mybpc2Q5XKE0 1136 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Efcab8Q8C9R9 203 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gnl3Q8CI11 538 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmco4Q91WU4 631 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Filip1Q9CS72 1211 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cyp39a1Q9JKJ9 470 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Zfp266E9Q2S7 604 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nr1d1Q3UV55 615 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Srrm1Q52KI8 946 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rpn1Q91YQ5 608 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Prmt7Q922X9 692 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 MsraQ9D6Y7 233 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Prl2c3P04768 224 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Camk4P08414 469 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 AgtP11859 477 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Clcn3P51791 818 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmem232Q5K6N0 675 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Irak1Q62406 710 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Zbtb5Q7TQG0 670 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Znf579Q80VM4 562 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PolrmtQ8BKF1 1207 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Amz1Q8BVF9 502 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmem132cQ8CEF9 1099 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ttc33Q9D6K7 262 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Pacsin2Q9WVE8 486 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 C1qbpO35658 278 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Casp14O89094 257 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fmr1P35922 614 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 SftpdP50404 374 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Atp9bP98195 1146 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rnf180Q3U827 592 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Lrrc14bQ3UJB3 510 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Dclk2Q6PGN3 756 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fam102aQ78T81 392 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Sirt2Q8VDQ8 389 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Kbtbd12Q9D618 625 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PolkQ9QUG2 852 aa12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Zranb2Q9R020 330 aaKnown RBP12.66□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm5926E9PWJ8 236 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 NogP97466 232 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 RadxQ8C779 850 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 H6pdQ8CFX1 789 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Twf1Q91YR1 350 aaKnown RBP12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nek3Q9R0A5 511 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmed2Q9R0Q3 201 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Usp17ldG5E8G2 545 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Usp17lcG5E8I7 545 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Smarca1Q6PGB8 1046 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 SrlQ7TQ48 910 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 F13a1Q8BH61 732 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PdxkQ8K183 312 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Smyd3Q9CWR2 428 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cep72Q9D3R3 646 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Syap1Q9D5V6 365 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmem206Q9D771 350 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Limd1Q9QXD8 668 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Heg1E9Q7X6 1337 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Snx12O70493 165 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmem260Q8BMD6 703 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tsen34Q8BMZ5 316 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Spata17Q9D552 379 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Kif9Q9WV04 790 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Sept7O55131 436 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Men1O88559 611 aaKnown RBP12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fam193bQ3U2K0 892 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Skap1Q3UUV5 355 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mief2Q5NCS9 454 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gemin4Q6P6L6 1058 aaKnown RBP12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 3830417A13RikQ8BQJ2 303 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mboat7Q8CHK3 473 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rsrc1Q9DBU6 334 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Pold3Q9EQ28 462 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trp53inp1Q9QXE4 239 aa12.65□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm3095E9Q058 166 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm6583E9Q8Z1 469 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pcsk1P63239 753 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Odr4Q4PJX1 447 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Myo1gQ5SUA5 1024 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Hsph1Q61699 858 aaKnown RBP12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Sh3tc2Q80VA5 1289 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 2610008E11RikG3X964 669 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PtpraP18052 829 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 UrosP51163 265 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rnf139Q7TMV1 668 aa12.64□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PpatQ8CIH9 517 aa12.64□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 16 ms