RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 PapolaQ61183 739 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sin3bQ62141 1098 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mindy1Q76LS9 468 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Suds3Q8BR65 328 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Spice1Q8C804 860 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PdxkQ8K183 312 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 HibchQ8QZS1 385 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ttc1Q91Z38 292 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Prpf4Q9DAW6 521 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Aldh18a1Q9Z110 795 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm11985A0A1B0GS61 206 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 EsrraO08580 422 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 GssP51855 474 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sec23aQ01405 765 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ece1Q4PZA2 769 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Prr18Q6PAN7 307 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tlr11Q6R5P0 926 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 DnerQ8JZM4 737 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Chn1Q91V57 459 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Bzw1Q9CQC6 419 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tmem206Q9D771 350 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ap2b1Q9DBG3 937 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 FignQ9ERZ6 759 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ddx20Q9JJY4 825 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pard6bQ9JK83 371 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lrrc38A2VDH3 298 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Apol7bB1AQP7 369 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Taf1bP97358 586 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Q3TQQ9 903 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mrps31Q61733 384 aaKnown RBP10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Usp49Q6P9L4 685 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ckap2lQ7TS74 745 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Arfip2Q8K221 341 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ankrd49Q8VE42 238 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 PlvapQ91VC4 438 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tceal1Q921P9 165 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ccdc22Q9JIG7 627 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Prg3Q9JL95 222 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gadd45gQ9Z111 159 aa10.56□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mrc1Q61830 1456 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 1700016G14RikA0A286YCZ6 238 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Stx1bP61264 288 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Hace1Q3U0D9 909 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Oog3Q3UWY1 500 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Samhd1Q60710 627 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ino80dQ66JY2 873 aaKnown RBP10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rhot1Q8BG51 631 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Osbpl2Q8BX94 484 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Il31raQ8K5B1 716 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ttc8Q8VD72 515 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tdrd3Q91W18 743 aaKnown RBP10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Wbp11Q923D5 641 aaKnown RBP10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Nfx1B1AY10 1114 aaKnown RBP10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lig1P37913 916 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gdf10P97737 476 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Krt26Q3TRJ4 462 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sult1d1Q3UZZ6 295 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tnni3kQ5GIG6 834 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lilrb4Q64281 335 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pip5kl1Q6U7H8 395 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Q80Y73 168 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Nr3c2Q8VII8 978 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Def8Q99J78 448 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ddx47Q9CWX9 455 aaKnown RBP10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Siglec1Q62230 1695 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fam129cD3YZB0 591 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Zfand4D3Z3C6 739 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Lrrc23O35125 340 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Pth1rP41593 591 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sesn2P58043 480 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Cyp2e1Q05421 493 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 InscQ3HNM7 579 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm11437Q5QR91 290 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 ZyxQ62523 564 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ptk6Q64434 451 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tcp10aQ80W76 438 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Klhl11Q8CE33 709 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Mettl13Q91YR5 698 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Vta1Q9CR26 309 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Rgs3Q9DC04 966 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gtf2ird1Q9JI57 1104 aaKnown RBP10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sertad1Q9JL10 236 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ercc4Q9QZD4 917 aa10.55□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm6657A0A1B0GRJ3 277 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Gm45261A0A1B0GSP6 197 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Olfr552E9Q545 317 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Tbx2Q60707 711 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Nwd2Q6P5U7 1742 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Adat2Q6P6J0 191 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Jade1Q6ZPI0 834 aaKnown RBP10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Prkag3Q8BGM7 489 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Cwf19l1Q8CI33 537 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Ppp4r1Q8K2V1 951 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Q8R1Y2 203 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 IrgqQ8VIM9 583 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 ToporslQ9D2F8 683 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Phf2Q9WTU0 1096 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Speer3W4VSP1 261 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Sycp3P70281 254 aa10.54□□□□□ -0.72
Ldlr-201ENSMUST00000034713 Fam89aQ14BJ1 175 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms