RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Extl2Q9ES89 330 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Slfn14V9GXG1 899 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Taf4bG5E8Z2 855 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 UgcgO88693 394 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 CatspereP0DP43 985 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Brd9Q3UQU0 596 aaKnown RBP11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Cd37Q61470 281 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Churc1Q6DG52 112 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Adgrg6Q6F3F9 1165 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Pgrmc2Q80UU9 217 aaKnown RBP11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Rusc1Q8BG26 893 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Nop53Q8BK35 484 aaKnown RBP11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Gbp9Q8BTS3 619 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Als2cr12Q8BVM7 383 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Plcg2Q8CIH5 1265 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Nup58Q8R332 587 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 CrebzfQ91ZR3 358 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Ubiad1Q9DC60 336 aa11.46□□□□□ -0.57
Ptcd1-201ENSMUST00000031628 Cntnap2Q9CPW0 1332 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gon4lQ9DB00 2260 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 DgkhD3YXJ0 1156 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ccdc6D3YZP9 469 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Sox13Q04891 613 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 4930502E18RikQ14BQ3 236 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Stxbp2Q64324 593 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Scaf8Q6DID3 1268 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cplx4Q80WM3 160 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Dusp4Q8BFV3 398 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pex19Q8VCI5 299 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ciapin1Q8WTY4 309 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gimap4Q99JY3 219 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Spc24Q9D083 201 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cfap57Q9D180 1249 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cfap53Q9D439 514 aa11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 SmapQ9R0P4 181 aaKnown RBP11.46□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 C87977A2A958 498 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Fam171a1A2ATK9 892 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pus7B7ZNL8 666 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm4758L7N258 96 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Serpinb8O08800 374 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Mmp15O54732 657 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cyp11b2P15539 500 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 FechP22315 420 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Vwa3aQ3UVV9 1148 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 CbarpQ66L44 698 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 TwistnbQ78WZ7 330 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Slc7a6osQ7TPE5 306 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ahcyl1Q80SW1 530 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Psmd5Q8BJY1 504 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Trpa1Q8BLA8 1125 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cpa5Q8R4H4 436 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 CrygnQ8VHL5 183 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cnga3Q9JJZ8 631 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ifi202Q9R002 445 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ep400Q8CHI8 3072 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Psme4Q5SSW2 1843 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Scn3aA2ASI5 1947 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm382B1AXN3 1250 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Atp9aO70228 1047 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Alox12eP55249 662 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ogfod1Q3U0K8 545 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zdhhc24Q6IR37 284 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Wdr44Q6NVE8 915 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Kctd6Q8BNL5 237 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Proser2Q8C5R2 471 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Slc26a6Q8CIW6 758 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Nxf1Q99JX7 618 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Bzw1Q9CQC6 419 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Znf654Q9DAU9 571 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 MesdQ9ERE7 224 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Akap8lQ9R0L7 642 aaKnown RBP11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Kif9Q9WV04 790 aa11.45□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Pdia2D3Z6P0 527 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Becn2P0DM65 447 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zfp957Q3UT76 567 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 PapolaQ61183 739 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Cnksr2Q80YA9 1032 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Lin9Q8C735 542 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Kcnv2Q8CFS6 562 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Eif3hQ91WK2 352 aaKnown RBP11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Ebag9Q9D0V7 213 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Prpf4Q9DAW6 521 aaKnown RBP11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Krt71Q9R0H5 524 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Morc1Q9WVL5 950 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Sept3Q9Z1S5 350 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Frmpd3A0A140LIW3 1774 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 NynrinQ5DTZ0 1840 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Atp2c2A7L9Z8 944 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Mms22lB1AUR6 1238 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm14525B1AZA0 212 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm2012B1B0R1 212 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Olfr552E9Q545 317 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Mfsd4b4J3QNS5 503 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Calb1P12658 261 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Hspa9P38647 679 aaKnown RBP11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Syt2P46097 422 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Gm14819Q62478 212 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Arl13bQ640N2 427 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Tpp2Q64514 1262 aa11.44□□□□□ -0.58
Ptcd1-201ENSMUST00000031628 Zcchc2Q69ZB8 1166 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms