RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Cd248Q91V98 765 aa17.71■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Coa7Q921H9 231 aa17.71■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Pdia6Q922R8 440 aaKnown RBP17.71■□□□□ 0.43
Col17a1-201ENSMUST00000026045 TarsQ9D0R2 722 aaKnown RBP17.71■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Mapk13Q9Z1B7 366 aa17.71■□□□□ 0.43
Col17a1-201ENSMUST00000026045 Rnf19bA2A7Q9 732 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Zfp558E9Q1J0 407 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ifi207E9Q3L4 978 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 GscQ02591 256 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Lmntd2Q0VET5 664 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Xxylt1Q3U4G3 392 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Klhl23Q6GQU2 558 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Thap11Q9JJD0 305 aa17.71■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Grem2O88273 168 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Tmco6Q8BQX5 494 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 E2f4Q8R0K9 410 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 R3hdm1E9Q9Q2 1135 aaKnown RBP17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ppm1kQ8BXN7 372 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Rfx6Q8C7R7 927 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 LrmdaQ9D9B4 229 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Gm7356A0A087WSA6 508 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Gm7168A0AUV4 508 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Glt1d1A4FUP9 346 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 C130060K24RikG3UWA8 416 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Rag1P15919 1040 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ccna1Q61456 421 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Itih1Q61702 907 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 HnrnprQ8VHM5 632 aaKnown RBP17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Eif2b2Q99LD9 351 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Kif19Q99PT9 997 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Snf8Q9CZ28 258 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Serpina1aP07758 413 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Lrrc24Q8BHA1 521 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Tasp1Q8R1G1 420 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Eif4enif1Q9EST3 983 aaKnown RBP17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ifi30Q9ESY9 248 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Dmap1Q9JI44 468 aa17.7■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Znf541Q0GGX2 1363 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Znf496Q5SXI5 585 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Tmtc4Q8BG19 741 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Parp9Q8CAS9 866 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Kat14Q8CID0 779 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Gps1Q99LD4 471 aaKnown RBP17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Syf2Q9D198 242 aaKnown RBP17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Foxm1O08696 760 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Cd72P21855 354 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Arl4cP61208 192 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ubn1Q4G0F8 1135 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Adck2Q6NSR3 617 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 ScocQ78YZ6 125 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Sap130Q8BIH0 1057 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 SmtnQ921U8 923 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Slfn1Q9Z0I7 337 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Gimd1E9PW74 217 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Cyp11b2P15539 500 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Wdr36Q3TAQ9 899 aaKnown RBP17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Palm2Q8BR92 376 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Snx30Q8CE50 437 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Defb15Q8R2I5 79 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Trip6Q9Z1Y4 480 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Prss51A0A286YDY8 319 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Tph1P17532 447 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Trim43bP86448 445 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Dlgap3Q6PFD5 977 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Prpf18Q8BM39 342 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Hacd3Q8K2C9 362 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Q91WD4 421 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Pole2O54956 527 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ascc2Q91WR3 749 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ivns1abpQ920Q8 642 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Cdc26Q99JP4 85 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Alpk1Q9CXB8 1231 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ddx25Q9QY15 484 aa17.69■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Trpm1Q2TV84 1622 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Kcnh4A2A5F7 1018 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ino80dQ66JY2 873 aaKnown RBP17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Znf280cQ6P3Y5 742 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 PodnQ7TQ62 611 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Znf467Q8JZL0 594 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Nsmce3Q9CPR8 279 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Apobec2Q9WV35 224 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Pdha2P35487 391 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Xlr3aQ60595 226 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 ItgalP24063 1163 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Gm5622Q810Q0 167 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Trim66Q924W6 1242 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Rpf2Q9JJ80 306 aaKnown RBP17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Ercc4Q9QZD4 917 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Lmnb1P14733 588 aaKnown RBP17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 VcpQ01853 806 aaKnown RBP17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Cracr2bQ80ZJ8 394 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Atp6v1g1Q9CR51 118 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Iqcf1Q9D9K8 182 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Akr1e2Q9DCT1 301 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Nek3Q9R0A5 511 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Phf2Q9WTU0 1096 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Adgrf5G5E8Q8 1348 aa17.68■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Hmgxb3G3X9M3 1254 aa17.67■□□□□ 0.42
Col17a1-201ENSMUST00000026045 CinpQ9D0V8 212 aa17.67■□□□□ 0.42
Col17a1-201ENSMUST00000026045 Scgb2b20Q9JI02 112 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms