RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Map3k12Q60700 888 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Tubgcp5Q8BKN5 1024 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cpsf7Q8BTV2 471 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Serpinb13Q8CDC0 389 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Med15Q924H2 789 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 AticQ9CWJ9 592 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ears2Q9CXJ1 523 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Fam187aQ9D3R5 417 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Prl7d1P04769 244 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Crhr1P35347 415 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ripk2P58801 539 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ythdf1P59326 559 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Fam129aQ3UW53 926 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Soat1Q61263 540 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Grid1Q61627 1009 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Map3k7Q62073 579 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Snx19Q6P4T1 997 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Tmem221Q8K071 230 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 YarsQ91WQ3 528 aaKnown RBP13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 DmgdhQ9DBT9 869 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Msh5Q9QUM7 833 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 Sh2d3cQ9QZS8 854 aa13.2□□□□□ -0.3
Trim23-201ENSMUST00000022225 4931408C20RikE9PWP9 1381 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Tal1P22091 329 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gsta3P30115 221 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Usp46P62069 366 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Phactr1Q2M3X8 580 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 RgmbQ7TQ33 436 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Sept9Q80UG5 583 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ints2Q80UK8 1198 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Fbxl13Q8CDU4 790 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cacnb1Q8R3Z5 597 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Prkag2Q91WG5 566 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cpb2Q9JHH6 422 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Stk32bQ9JJX8 414 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rbm6S4R1W5 1118 aaKnown RBP13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Idh1O88844 414 aaKnown RBP13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 GabrdP22933 449 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 SbdsP70122 250 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Nsun7Q14AW5 724 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Q3V0E1 1183 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gm14685Q52KH6 695 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Stxbp5lQ5DQR4 1185 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Fam107aQ78TU8 144 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gm5622Q810Q0 167 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Bbs9Q811G0 885 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Hyou1Q9JKR6 999 aaKnown RBP13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Apol10bG3X9K7 334 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ap1b1O35643 943 aaKnown RBP13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Eps15P42567 897 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cdk7Q03147 346 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cntn3Q07409 1028 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gm1604bQ3TRG0 118 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Grm6Q5NCH9 871 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Jade3Q6IE82 823 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Lrig3Q6P1C6 1117 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rcn2Q8BP92 320 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ttc39bQ8BYY4 617 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ldlrap1Q8C142 308 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Hectd2Q8CDU6 774 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Pcolce2Q8R4W6 414 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 ZgpatQ8VDM1 511 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Arhgef3Q91X46 524 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Tom1l1Q923U0 474 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Nde1Q9CZA6 344 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gsdmdc1Q9D8T2 487 aa13.19□□□□□ -0.3
Trim23-201ENSMUST00000022225 Scn11aQ9R053 1765 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Lrrc74aA0A1Y7VMD6 494 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 MtrA6H5Y3 1253 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rsbn1lD3Z0K6 821 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gna11P21278 359 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Zc3h18Q0P678 948 aaKnown RBP13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Q14AM7 275 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Dcaf17Q3TUL7 519 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Islr2Q5RKR3 745 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Herc4Q6PAV2 1057 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Btbd10Q80X66 475 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Mill1Q8HWE7 395 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cap2Q9CYT6 476 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Plscr1Q9JJ00 328 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Abcb9Q9JJ59 762 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Plagl1Q9JLQ4 704 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 RpgrQ9R0X5 1001 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gm5737A0A140LI11 423 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Lonrf2B2RT44 518 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Gm4297D3YWB7 211 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rfpl4bJ3QPR6 266 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rasgrf2P70392 1189 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Krt15Q61414 452 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ubxn7Q6P5G6 467 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Bmt2Q8BXK4 403 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Ascc2Q91WR3 749 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Usp11Q99K46 921 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Nip7Q9CXK8 180 aaKnown RBP13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Mrps22Q9CXW2 359 aa13.18□□□□□ -0.3
Trim23-201ENSMUST00000022225 Cfap221A9Q751 836 aa13.17□□□□□ -0.3
Trim23-201ENSMUST00000022225 AlplP09242 524 aa13.17□□□□□ -0.3
Trim23-201ENSMUST00000022225 Rpl5P47962 297 aaKnown RBP13.17□□□□□ -0.3
Trim23-201ENSMUST00000022225 Agap2Q3UHD9 1186 aa13.17□□□□□ -0.3
Trim23-201ENSMUST00000022225 Mthfd1lQ3V3R1 977 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms