RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Prl6a1O35257 230 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Syt2P46097 422 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Fgfr4Q03142 799 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Nlrp4cQ3TKR3 982 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Enoph1Q8BGB7 257 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Pabpc6Q9D4E6 643 aaKnown RBP17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 ArcQ9WV31 396 aa17.4■□□□□ 0.38
Trim28-201ENSMUST00000005705 Apol7bB1AQP7 369 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Stk10O55098 966 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 FechP22315 420 aaKnown RBP17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Smad1P70340 465 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Apol7eQ3UZ24 369 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Scfd1Q8BRF7 639 aaKnown RBP17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cbwd1Q8VEH6 393 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Bzw2Q91VK1 419 aaKnown RBP17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Anapc4Q91W96 807 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 IscuQ9D7P6 168 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rtn3Q9ES97 964 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Nfs1Q9Z1J3 459 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Net1Q9Z206 595 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gm45837F7D3W5 961 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Usp17ldG5E8G2 545 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Usp17lcG5E8I7 545 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gucy2fQ5SDA5 1108 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 HnrnpdQ60668 355 aaKnown RBP17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Slc7a6osQ7TPE5 306 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cpa1Q7TPZ8 419 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Camkk2Q8C078 588 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cfap36Q8C6E0 343 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Znf830Q8R1N0 363 aaKnown RBP17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Sgms1Q8VCQ6 419 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ccdc65Q8VHI7 493 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Pde2aQ922S4 916 aa17.39■□□□□ 0.37
Trim28-201ENSMUST00000005705 Diaph2O70566 1098 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Mpp3O88910 568 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Agxt2Q3UEG6 513 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Pgrmc2Q80UU9 217 aaKnown RBP17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Pym1Q8CHP5 203 aaKnown RBP17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cyth1Q9QX11 398 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 MyocO70624 490 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 GclcP97494 637 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Znf354cQ571J5 560 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 PreplQ8C167 725 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Tti1Q91V83 1085 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Scgb2b20Q9JI02 112 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rgs9bpQ148R9 237 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ndufaf2Q59J78 168 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Pja2Q80U04 707 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ldlrap1Q8C142 308 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cuedc2Q9CXX9 284 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 PrameQ9D4Z5 464 aa17.38■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cdr2lA2A6T1 465 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Oip5A2AQ14 241 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ttll10A4Q9F3 704 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Zfy1P10925 782 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Palb2Q3U0P1 1104 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ubap1Q8BH48 502 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Snx14Q8BHY8 964 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ccdc134Q8C7V8 229 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gnl3Q8CI11 538 aaKnown RBP17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Gtf2ird1Q9JI57 1104 aaKnown RBP17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Nrg3O35181 713 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 LipeP54310 759 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ephb2P54763 986 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Irf6P97431 467 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Zcchc2Q69ZB8 1166 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 DcakdQ8BHC4 231 aaKnown RBP17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 PaoxQ8C0L6 504 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Leg1Q8C6C9 337 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Lin9Q8C735 542 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Trim66Q924W6 1242 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Scnn1bQ9WU38 638 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Zbtb12Q9Z150 459 aa17.37■□□□□ 0.37
Trim28-201ENSMUST00000005705 Myh14Q6URW6 2000 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Col1a1P11087 1453 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 4933406M09RikG3XA12 479 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Atp9aO70228 1047 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Tagap1P0CAX8 505 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 OgdhQ60597 1023 aaKnown RBP17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Rasa3Q60790 834 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Fgfr1opQ66JX5 399 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Q6PD19 689 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Zfp341Q6PGC9 846 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 PodnQ7TQ62 611 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ppp1r16bQ8VHQ3 568 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cfap53Q9D439 514 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ccdc91Q9D8L5 442 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Q9DAQ4 598 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Eya4Q9Z191 616 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Nup62clA2AG10 272 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Cdk14O35495 469 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 UgcgO88693 394 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Epb41l4aP52963 686 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 GmncQ3URY2 333 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Ppp1r1bQ60829 194 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Nlrp14Q6B966 993 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Znf618Q80YY7 953 aaKnown RBP17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Krt17Q9QWL7 433 aa17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Noc2lQ9WV70 747 aaKnown RBP17.36■□□□□ 0.37
Trim28-201ENSMUST00000005705 Col4a5Q63ZW6 1691 aa17.36■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 49.1 ms