RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W EMC6Q12431 108 aa0.61□□□□□ -2.31
SGF11YPL047W YAL063C-AQ3E791 96 aa0.61□□□□□ -2.31
SGF11YPL047W TFS1P14306 219 aa0.6□□□□□ -2.31
SGF11YPL047W IFM1P25038 676 aa0.6□□□□□ -2.31
SGF11YPL047W MEI5P32489 222 aa0.6□□□□□ -2.31
SGF11YPL047W MRPL6P32904 214 aa0.6□□□□□ -2.31
SGF11YPL047W YSW1P38280 609 aa0.6□□□□□ -2.31
SGF11YPL047W GRE3P38715 327 aaKnown RBP RIP-Chip data0.6□□□□□ -2.31not detected
SGF11YPL047W PET8P38921 284 aa0.6□□□□□ -2.31
SGF11YPL047W SOP4P39543 234 aaPredicted RBP0.6□□□□□ -2.31
SGF11YPL047W GDI1P39958 451 aaKnown RBP0.6□□□□□ -2.31
SGF11YPL047W COG3P40094 801 aa0.6□□□□□ -2.31
SGF11YPL047W PIR5P46999 287 aa0.6□□□□□ -2.31
SGF11YPL047W YJR146WP47174 117 aa0.6□□□□□ -2.31
SGF11YPL047W DSK2P48510 373 aa0.6□□□□□ -2.31
SGF11YPL047W BIO4P53630 237 aa0.6□□□□□ -2.31
SGF11YPL047W YMR166CQ03829 368 aa0.6□□□□□ -2.31
SGF11YPL047W SXM1Q04175 944 aaKnown RBP0.6□□□□□ -2.31
SGF11YPL047W FCF1Q05498 189 aaPredicted RBP0.6□□□□□ -2.31
SGF11YPL047W ARC18Q05933 178 aaKnown RBP0.6□□□□□ -2.31
SGF11YPL047W AGC1Q12482 902 aa0.6□□□□□ -2.31
SGF11YPL047W PAR32Q12515 295 aaKnown RBP0.6□□□□□ -2.31
SGF11YPL047W NBL1Q3E7Y6 73 aa0.6□□□□□ -2.31
SGF11YPL047W SPS100P13130 326 aa0.59□□□□□ -2.31
SGF11YPL047W CIN8P27895 1000 aa0.59□□□□□ -2.31
SGF11YPL047W MYO3P36006 1272 aa0.59□□□□□ -2.31
SGF11YPL047W GPX1P36014 167 aa0.59□□□□□ -2.31
SGF11YPL047W DAD2P36162 133 aa0.59□□□□□ -2.31
SGF11YPL047W MRPL3P36516 390 aa0.59□□□□□ -2.31
SGF11YPL047W MBA1P38300 278 aa0.59□□□□□ -2.31
SGF11YPL047W SUR2P38992 349 aa0.59□□□□□ -2.31
SGF11YPL047W AVT6P40074 448 aa0.59□□□□□ -2.31
SGF11YPL047W PXR1P53335 271 aaPredicted RBP0.59□□□□□ -2.31
SGF11YPL047W ALG9P53868 555 aaKnown RBP0.59□□□□□ -2.31
SGF11YPL047W NNT1Q05874 261 aa0.59□□□□□ -2.31
SGF11YPL047W YLR446WQ06204 433 aa0.59□□□□□ -2.31
SGF11YPL047W CTS2Q06350 511 aa0.59□□□□□ -2.31
SGF11YPL047W GLE1Q12315 538 aa0.59□□□□□ -2.31
SGF11YPL047W DCP1Q12517 231 aaPredicted RBP0.59□□□□□ -2.31
SGF11YPL047W RGS2Q99188 309 aa0.59□□□□□ -2.31
SGF11YPL047W OSM1P21375 501 aaKnown RBP0.58□□□□□ -2.32
SGF11YPL047W HXT2P23585 541 aa0.58□□□□□ -2.32
SGF11YPL047W MNE1P24720 663 aa0.58□□□□□ -2.32
SGF11YPL047W CDC13P32797 924 aaKnown RBP0.58□□□□□ -2.32
SGF11YPL047W MCH2P36032 473 aa0.58□□□□□ -2.32
SGF11YPL047W YHR035WP38769 630 aa0.58□□□□□ -2.32
SGF11YPL047W SPL2P38839 148 aa0.58□□□□□ -2.32
SGF11YPL047W UTP25P40498 721 aaKnown RBP0.58□□□□□ -2.32
SGF11YPL047W SEC28P40509 296 aaKnown RBP0.58□□□□□ -2.32
SGF11YPL047W YGR016WP53209 190 aa0.58□□□□□ -2.32
SGF11YPL047W SUE1Q06524 206 aa0.58□□□□□ -2.32
SGF11YPL047W YOR268CQ08734 132 aa0.58□□□□□ -2.32
SGF11YPL047W YDR262WQ12331 272 aa0.58□□□□□ -2.32
SGF11YPL047W ATG5Q12380 294 aa0.58□□□□□ -2.32
SGF11YPL047W LAG2Q92325 660 aa0.58□□□□□ -2.32
SGF11YPL047W TDH1P00360 332 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W YLL053CP0CD98 152 aa0.57□□□□□ -2.32
SGF11YPL047W VMA5P31412 392 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W COY1P34237 679 aa0.57□□□□□ -2.32
SGF11YPL047W YOR062CP36025 268 aa0.57□□□□□ -2.32
SGF11YPL047W PRP39P39682 629 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W VAB2P40003 282 aa0.57□□□□□ -2.32
SGF11YPL047W TIF34P40217 347 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W INA22P40576 216 aa0.57□□□□□ -2.32
SGF11YPL047W YFR054CP43622 192 aa0.57□□□□□ -2.32
SGF11YPL047W YJL027CP47063 138 aaPredicted RBP0.57□□□□□ -2.32
SGF11YPL047W YJL016WP47072 561 aa0.57□□□□□ -2.32
SGF11YPL047W MPP10P47083 593 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W PRP24P49960 444 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W COG7P53195 279 aa0.57□□□□□ -2.32
SGF11YPL047W CAB4P53332 305 aa0.57□□□□□ -2.32
SGF11YPL047W RVB1Q03940 463 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W GRH1Q04410 372 aaKnown RBP0.57□□□□□ -2.32
SGF11YPL047W RDS3Q06835 107 aaPredicted RBP0.57□□□□□ -2.32
SGF11YPL047W BOL1Q3E793 110 aa0.57□□□□□ -2.32
SGF11YPL047W RAD7P06779 565 aa0.56□□□□□ -2.32
SGF11YPL047W ERD1P16151 362 aa0.56□□□□□ -2.32
SGF11YPL047W TPO5P36029 618 aa0.56□□□□□ -2.32
SGF11YPL047W ADH5P38113 351 aaKnown RBP0.56□□□□□ -2.32
SGF11YPL047W YHL026CP38740 315 aa0.56□□□□□ -2.32
SGF11YPL047W YHI9P38765 294 aa0.56□□□□□ -2.32
SGF11YPL047W ALP1P38971 573 aa0.56□□□□□ -2.32
SGF11YPL047W AYR1P40471 297 aa0.56□□□□□ -2.32
SGF11YPL047W TPN1P53099 579 aa0.56□□□□□ -2.32
SGF11YPL047W YNL143CP53908 130 aa0.56□□□□□ -2.32
SGF11YPL047W EOS1P53938 366 aa0.56□□□□□ -2.32
SGF11YPL047W SLM2P53955 656 aa0.56□□□□□ -2.32
SGF11YPL047W IRC4Q03036 179 aa0.56□□□□□ -2.32
SGF11YPL047W SNX41Q04053 625 aa0.56□□□□□ -2.32
SGF11YPL047W YPL150WQ12152 901 aa0.56□□□□□ -2.32
SGF11YPL047W NOT5Q12514 560 aaPredicted RBP0.56□□□□□ -2.32
SGF11YPL047W YHR086W-AQ3E746 53 aa0.56□□□□□ -2.32
SGF11YPL047W TOM40P23644 387 aaKnown RBP0.55□□□□□ -2.32
SGF11YPL047W YCR025CP25352 136 aa0.55□□□□□ -2.32
SGF11YPL047W ATG15P25641 520 aa0.55□□□□□ -2.32
SGF11YPL047W RPL16BP26785 198 aaKnown RBP0.55□□□□□ -2.32
SGF11YPL047W AEP1P32493 518 aa0.55□□□□□ -2.32
SGF11YPL047W VPH1P32563 840 aaKnown RBP0.55□□□□□ -2.32
SGF11YPL047W IMP3P32899 183 aaPredicted RBP0.55□□□□□ -2.32
SGF11YPL047W DRE2P36152 348 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms