RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W IZH4Q99393 312 aa3.1□□□□□ -1.91
VPS17YOR132W TDH2P00358 332 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W COX2P00410 251 aa3.09□□□□□ -1.91
VPS17YOR132W MES1P00958 751 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W RPL12AP0CX53 165 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W RPL12BP0CX54 165 aa3.09□□□□□ -1.91
VPS17YOR132W MATALPHA1P0CY06 175 aa3.09□□□□□ -1.91
VPS17YOR132W HMLALPHA1P0CY07 175 aa3.09□□□□□ -1.91
VPS17YOR132W YCR022CP25620 114 aa3.09□□□□□ -1.91
VPS17YOR132W CSM1P25651 190 aa3.09□□□□□ -1.91
VPS17YOR132W FUN19P28003 413 aaPredicted RBP3.09□□□□□ -1.91
VPS17YOR132W YKL162CP36052 402 aa3.09□□□□□ -1.91
VPS17YOR132W YKL071WP36086 256 aa3.09□□□□□ -1.91
VPS17YOR132W PDX3P38075 228 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W TDA11P38854 504 aa3.09□□□□□ -1.91
VPS17YOR132W YHB1P39676 399 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W YER079WP40052 210 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W DSE1P40077 573 aa3.09□□□□□ -1.91
VPS17YOR132W ALG8P40351 577 aa3.09□□□□□ -1.91
VPS17YOR132W RRT5P43607 289 aa3.09□□□□□ -1.91
VPS17YOR132W YAR1P46683 200 aa3.09□□□□□ -1.91
VPS17YOR132W SPP2Q02521 185 aa3.09□□□□□ -1.91
VPS17YOR132W GIP3Q03016 1276 aa3.09□□□□□ -1.91
VPS17YOR132W ENT5Q03769 411 aaKnown RBP3.09□□□□□ -1.91
VPS17YOR132W TVP15Q03860 143 aa3.09□□□□□ -1.91
VPS17YOR132W ASA1Q06822 443 aa3.09□□□□□ -1.91
VPS17YOR132W SLD7Q08457 257 aa3.09□□□□□ -1.91
VPS17YOR132W YOR029WQ12243 111 aa3.09□□□□□ -1.91
VPS17YOR132W YMR030W-AQ3E760 96 aa3.09□□□□□ -1.91
VPS17YOR132W UBA3Q99344 299 aa3.09□□□□□ -1.91
VPS17YOR132W RIF1P29539 1916 aa3.09□□□□□ -1.92
VPS17YOR132W HEM2P05373 342 aa3.08□□□□□ -1.92
VPS17YOR132W DST1P07273 309 aa3.08□□□□□ -1.92
VPS17YOR132W GPA2P10823 449 aa3.08□□□□□ -1.92
VPS17YOR132W CBS2P14905 389 aa3.08□□□□□ -1.92
VPS17YOR132W YPK2P18961 677 aa3.08□□□□□ -1.92
VPS17YOR132W URA10P30402 227 aa3.08□□□□□ -1.92
VPS17YOR132W ZIP1P31111 875 aa3.08□□□□□ -1.92
VPS17YOR132W ZUO1P32527 433 aaKnown RBP3.08□□□□□ -1.92
VPS17YOR132W SPT10P35208 640 aa3.08□□□□□ -1.92
VPS17YOR132W COS9P36034 407 aa3.08□□□□□ -1.92
VPS17YOR132W YMR262WP38430 313 aa3.08□□□□□ -1.92
VPS17YOR132W AIM18P38884 321 aa3.08□□□□□ -1.92
VPS17YOR132W FRT2P39734 528 aa3.08□□□□□ -1.92
VPS17YOR132W UTP25P40498 721 aaKnown RBP3.08□□□□□ -1.92
VPS17YOR132W HAM1P47119 197 aaKnown RBP3.08□□□□□ -1.92
VPS17YOR132W BOR1P53838 576 aa3.08□□□□□ -1.92
VPS17YOR132W YIF1P53845 314 aaKnown RBP3.08□□□□□ -1.92
VPS17YOR132W YNL247WP53852 767 aaKnown RBP3.08□□□□□ -1.92
VPS17YOR132W HXT11P54862 567 aa3.08□□□□□ -1.92
VPS17YOR132W MZM1Q03429 123 aaPredicted RBP3.08□□□□□ -1.92
VPS17YOR132W RAX1Q08760 435 aa3.08□□□□□ -1.92
VPS17YOR132W YPR1Q12458 312 aa3.08□□□□□ -1.92
VPS17YOR132W RGS2Q99188 309 aa3.08□□□□□ -1.92
VPS17YOR132W YOS9Q99220 542 aa3.08□□□□□ -1.92
VPS17YOR132W ECM29P38737 1868 aa3.08□□□□□ -1.92
VPS17YOR132W MAS2P11914 482 aa3.08□□□□□ -1.92
VPS17YOR132W HSP26P15992 214 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
VPS17YOR132W REC114P32841 428 aa3.08□□□□□ -1.92
VPS17YOR132W SKG6P32900 734 aaPredicted RBP3.08□□□□□ -1.92
VPS17YOR132W MAL32P38158 584 aa3.08□□□□□ -1.92
VPS17YOR132W ATG12P38316 186 aa3.08□□□□□ -1.92
VPS17YOR132W YER186CP40101 306 aa3.08□□□□□ -1.92
VPS17YOR132W IDP2P41939 412 aa3.08□□□□□ -1.92
VPS17YOR132W TOS2P50078 622 aa3.08□□□□□ -1.92
VPS17YOR132W MAL12P53341 584 aa3.08□□□□□ -1.92
VPS17YOR132W RCF2P53721 224 aa3.08□□□□□ -1.92
VPS17YOR132W BNA7Q04066 261 aa3.08□□□□□ -1.92
VPS17YOR132W YDR387CQ04162 555 aa3.08□□□□□ -1.92
VPS17YOR132W SMP3Q04174 516 aa3.08□□□□□ -1.92
VPS17YOR132W YLR283WQ05867 314 aa3.08□□□□□ -1.92
VPS17YOR132W BUR2Q05949 395 aa3.08□□□□□ -1.92
VPS17YOR132W GET4Q12125 312 aa3.08□□□□□ -1.92
VPS17YOR132W ADH2P00331 348 aaKnown RBP3.07□□□□□ -1.92
VPS17YOR132W GCY1P14065 312 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
VPS17YOR132W MET16P18408 261 aaPredicted RBP3.07□□□□□ -1.92
VPS17YOR132W MXR2P25566 168 aa3.07□□□□□ -1.92
VPS17YOR132W RPS5P26783 225 aaKnown RBP3.07□□□□□ -1.92
VPS17YOR132W ITR1P30605 584 aa3.07□□□□□ -1.92
VPS17YOR132W YKL097CP34245 136 aa3.07□□□□□ -1.92
VPS17YOR132W KDX1P36005 433 aa3.07□□□□□ -1.92
VPS17YOR132W AIM29P36154 155 aa3.07□□□□□ -1.92
VPS17YOR132W YHI9P38765 294 aa3.07□□□□□ -1.92
VPS17YOR132W NPT1P39683 429 aaKnown RBP3.07□□□□□ -1.92
VPS17YOR132W YAL037WP39728 267 aa3.07□□□□□ -1.92
VPS17YOR132W HAT2P39984 401 aa3.07□□□□□ -1.92
VPS17YOR132W PDS1P40316 373 aaPredicted RBP3.07□□□□□ -1.92
VPS17YOR132W HPM1P40481 377 aa3.07□□□□□ -1.92
VPS17YOR132W YJR054WP47114 497 aa3.07□□□□□ -1.92
VPS17YOR132W NOP13P53883 403 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
VPS17YOR132W ALG11P53954 548 aaKnown RBP3.07□□□□□ -1.92
VPS17YOR132W RSA1Q08932 381 aa3.07□□□□□ -1.92
VPS17YOR132W PAB1P04147 577 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
VPS17YOR132W SLM5P25345 492 aaKnown RBP3.06□□□□□ -1.92
VPS17YOR132W PUT3P25502 979 aaPredicted RBP3.06□□□□□ -1.92
VPS17YOR132W PBN1P25580 416 aa3.06□□□□□ -1.92
VPS17YOR132W TFC1P32367 649 aa3.06□□□□□ -1.92
VPS17YOR132W PHA2P32452 334 aa3.06□□□□□ -1.92
VPS17YOR132W APE2P32454 952 aaKnown RBP3.06□□□□□ -1.92
VPS17YOR132W PTC1P35182 281 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms