RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C VAB2P40003 282 aa2.76□□□□□ -1.97
WHI3YNL197C MRX5P47007 382 aa2.76□□□□□ -1.97
WHI3YNL197C YPS5P53057 165 aa2.76□□□□□ -1.97
WHI3YNL197C YGR018CP53211 109 aa2.76□□□□□ -1.97
WHI3YNL197C YNL134CP53912 376 aaKnown RBP2.76□□□□□ -1.97
WHI3YNL197C RNH1Q04740 348 aa2.76□□□□□ -1.97
WHI3YNL197C YLR173WQ06247 608 aa2.76□□□□□ -1.97
WHI3YNL197C CTS2Q06350 511 aa2.76□□□□□ -1.97
WHI3YNL197C ARV1Q06541 321 aa2.76□□□□□ -1.97
WHI3YNL197C POM33Q12164 279 aa2.76□□□□□ -1.97
WHI3YNL197C YPR064WQ12492 139 aa2.76□□□□□ -1.97
WHI3YNL197C INO2P26798 304 aa2.76□□□□□ -1.97
WHI3YNL197C RRG9P40156 214 aa2.76□□□□□ -1.97
WHI3YNL197C TPN1P53099 579 aa2.76□□□□□ -1.97
WHI3YNL197C NRM1P53718 249 aa2.76□□□□□ -1.97
WHI3YNL197C YMR209CQ03648 457 aa2.76□□□□□ -1.97
WHI3YNL197C GMC1Q04399 608 aa2.76□□□□□ -1.97
WHI3YNL197C PEX30Q06169 523 aa2.76□□□□□ -1.97
WHI3YNL197C LOA1Q06508 300 aa2.76□□□□□ -1.97
WHI3YNL197C YOR292CQ08743 309 aa2.76□□□□□ -1.97
WHI3YNL197C SRO7Q12038 1033 aa2.76□□□□□ -1.97
WHI3YNL197C YPL245WQ12179 454 aaKnown RBP2.76□□□□□ -1.97
WHI3YNL197C YOR114WQ12219 294 aa2.76□□□□□ -1.97
WHI3YNL197C YOL107WQ12239 342 aa2.76□□□□□ -1.97
WHI3YNL197C RAX2Q12465 1220 aa2.76□□□□□ -1.97
WHI3YNL197C LAG2Q92325 660 aa2.76□□□□□ -1.97
WHI3YNL197C PCL1P24867 279 aa2.75□□□□□ -1.97
WHI3YNL197C RRT12P25381 491 aa2.75□□□□□ -1.97
WHI3YNL197C LDB16P25587 256 aa2.75□□□□□ -1.97
WHI3YNL197C CWP1P28319 239 aa2.75□□□□□ -1.97
WHI3YNL197C IES6P32617 166 aa2.75□□□□□ -1.97
WHI3YNL197C MRPL6P32904 214 aa2.75□□□□□ -1.97
WHI3YNL197C SPT4P32914 102 aaPredicted RBP2.75□□□□□ -1.97
WHI3YNL197C EFM1P38732 585 aa2.75□□□□□ -1.97
WHI3YNL197C SHE10P53075 577 aa2.75□□□□□ -1.97
WHI3YNL197C KTR6P54070 446 aa2.75□□□□□ -1.97
WHI3YNL197C MRPS16Q02608 121 aa2.75□□□□□ -1.97
WHI3YNL197C INP2Q03824 705 aa2.75□□□□□ -1.97
WHI3YNL197C API2Q04413 109 aa2.75□□□□□ -1.97
WHI3YNL197C ADH1P00330 348 aaKnown RBP2.74□□□□□ -1.97
WHI3YNL197C YCR025CP25352 136 aa2.74□□□□□ -1.97
WHI3YNL197C SKG6P32900 734 aaPredicted RBP2.74□□□□□ -1.97
WHI3YNL197C GPI18P38211 433 aa2.74□□□□□ -1.97
WHI3YNL197C TIM21P53220 239 aa2.74□□□□□ -1.97
WHI3YNL197C SRL4Q03085 281 aa2.74□□□□□ -1.97
WHI3YNL197C VHS1Q03785 461 aa2.74□□□□□ -1.97
WHI3YNL197C SEC13Q04491 297 aaKnown RBP2.74□□□□□ -1.97
WHI3YNL197C ILV1P00927 576 aaKnown RBP2.74□□□□□ -1.97
WHI3YNL197C HSP26P15992 214 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
WHI3YNL197C MET16P18408 261 aaPredicted RBP2.74□□□□□ -1.97
WHI3YNL197C POF1P25576 258 aa2.74□□□□□ -1.97
WHI3YNL197C ATG12P38316 186 aa2.74□□□□□ -1.97
WHI3YNL197C GGC1P38988 300 aa2.74□□□□□ -1.97
WHI3YNL197C IBA57P47158 497 aa2.74□□□□□ -1.97
WHI3YNL197C RPL21AQ02753 160 aaKnown RBP2.74□□□□□ -1.97
WHI3YNL197C YMR244WQ04018 355 aa2.74□□□□□ -1.97
WHI3YNL197C BOP2Q06150 570 aa2.74□□□□□ -1.97
WHI3YNL197C ATG31Q12421 196 aa2.74□□□□□ -1.97
WHI3YNL197C PET494P07390 489 aaPredicted RBP2.73□□□□□ -1.97
WHI3YNL197C AEP1P32493 518 aa2.73□□□□□ -1.97
WHI3YNL197C MBA1P38300 278 aa2.73□□□□□ -1.97
WHI3YNL197C CPD1P53314 239 aa2.73□□□□□ -1.97
WHI3YNL197C HAL1Q01766 294 aa2.73□□□□□ -1.97
WHI3YNL197C RNY1Q02933 434 aaKnown RBP2.73□□□□□ -1.97
WHI3YNL197C IFM1P25038 676 aa2.72□□□□□ -1.97
WHI3YNL197C SPS19P32573 292 aaKnown RBP2.72□□□□□ -1.97
WHI3YNL197C IME2P32581 645 aa2.72□□□□□ -1.97
WHI3YNL197C YGL262WP53054 175 aa2.72□□□□□ -1.97
WHI3YNL197C DPP1Q05521 289 aa2.72□□□□□ -1.97
WHI3YNL197C ECM19Q06011 112 aa2.72□□□□□ -1.97
WHI3YNL197C BSC6Q08280 497 aa2.72□□□□□ -1.97
WHI3YNL197C RRP42Q12277 265 aaPredicted RBP2.72□□□□□ -1.97
WHI3YNL197C YAL067W-AQ8TGK6 75 aa2.72□□□□□ -1.97
WHI3YNL197C CBP6P07253 162 aaPredicted RBP2.72□□□□□ -1.97
WHI3YNL197C REV1P12689 985 aa2.72□□□□□ -1.97
WHI3YNL197C DAL81P21657 970 aa2.72□□□□□ -1.97
WHI3YNL197C ARO4P32449 370 aaKnown RBP2.72□□□□□ -1.97
WHI3YNL197C UTH1P36135 365 aa2.72□□□□□ -1.97
WHI3YNL197C FRM2P37261 193 aa2.72□□□□□ -1.97
WHI3YNL197C PRS4P38063 326 aaPredicted RBP2.72□□□□□ -1.97
WHI3YNL197C RFT1P38206 574 aaPredicted RBP2.72□□□□□ -1.97
WHI3YNL197C HSM3P38348 480 aa2.72□□□□□ -1.97
WHI3YNL197C YHR045WP38775 560 aa2.72□□□□□ -1.97
WHI3YNL197C TDA11P38854 504 aa2.72□□□□□ -1.97
WHI3YNL197C SPT8P38915 602 aa2.72□□□□□ -1.97
WHI3YNL197C FMP48P53233 369 aa2.72□□□□□ -1.97
WHI3YNL197C ACT1P60010 375 aaKnown RBP2.72□□□□□ -1.97
WHI3YNL197C OST6Q03723 332 aa2.72□□□□□ -1.97
WHI3YNL197C SDO1Q07953 250 aaKnown RBP2.72□□□□□ -1.97
WHI3YNL197C TPI1P00942 248 aaKnown RBP2.71□□□□□ -1.98
WHI3YNL197C RAD3P06839 778 aa2.71□□□□□ -1.98
WHI3YNL197C ATG15P25641 520 aa2.71□□□□□ -1.98
WHI3YNL197C SUA5P32579 426 aa2.71□□□□□ -1.98
WHI3YNL197C CSE1P33307 960 aa2.71□□□□□ -1.98
WHI3YNL197C DBP7P36120 742 aaKnown RBP2.71□□□□□ -1.98
WHI3YNL197C BIG1P38813 335 aa2.71□□□□□ -1.98
WHI3YNL197C RRT13P40042 185 aa2.71□□□□□ -1.98
WHI3YNL197C DDI1P40087 428 aa2.71□□□□□ -1.98
WHI3YNL197C SER33P40510 469 aa2.71□□□□□ -1.98
WHI3YNL197C YIA6P40556 373 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms