RNA–Protein interactions for RNA: YMR012W

CLU1, Transcript of Subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene CLU1, Length 3,834 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLU1	YMR012W	VPS74	Q06385	345 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	YPL119C-A	Q3E751	87 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	ISY1	P21374	235 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	YCR025C	P25352	136 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	PUT3	P25502	979 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	CDC13	P32797	924 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	SHP1	P34223	423 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	RPC25	P35718	212 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	YER085C	P40058	173 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	OST1	P41543	476 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	HSH155	P49955	971 aa	Known RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	TRM9	P49957	279 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	SBH2	P52871	88 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	TPC1	P53257	314 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	YMR034C	Q05131	434 aa	Predicted RBP	1.08	□□□□□ -2.24
CLU1	YMR012W	RRG8	Q06109	277 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	RAD34	Q06665	692 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	GRS2	Q06817	618 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	HEM25	Q07534	307 aa		1.08	□□□□□ -2.24
CLU1	YMR012W	CCW14	O13547	238 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	RNR2	P09938	399 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	GPX2	P38143	162 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	SSP120	P39931	234 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	YAT2	P40017	923 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	ERG28	P40030	148 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	LYS12	P40495	371 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	SNM1	P40993	198 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	MIG2	P53035	382 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YIP3	P53633	176 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	RSN1	Q03516	953 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	THI20	Q08224	551 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	RAX1	Q08760	435 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YPR011C	Q12251	326 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	DCP1	Q12517	231 aa	Predicted RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	CAP2	P13517	287 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	CPR1	P14832	162 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	SNF6	P18888	332 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	CTR86	P25355	563 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	ATP3	P38077	311 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	TIF34	P40217	347 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	ICE2	P40499	491 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	GAB1	P41733	394 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	TAD2	P47058	250 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	MNN10	P50108	393 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	YIP1	P53039	248 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	NIF3	P53081	288 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	ERG5	P54781	538 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YML122C	Q03207	126 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YET2	Q04210	160 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	RIF2	Q06208	395 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	PAM18	Q07914	168 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	ILV1	P00927	576 aa	Known RBP	1.07	□□□□□ -2.24
CLU1	YMR012W	STE7	P06784	515 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	CDC6	P09119	513 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	CPT1	P17898	393 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	QRI5	P32344	111 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	PHA2	P32452	334 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	IDP2	P41939	412 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	SPG5	P42933	373 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	POP6	P53218	158 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	GPI1	P53306	609 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	SPO19	Q03029	223 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	RSC9	Q03124	581 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YMR166C	Q03829	368 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	PEX10	Q05568	337 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YFH1	Q07540	174 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	SHS1	Q07657	551 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	ORT1	Q12375	292 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	YCR024C-B	Q3E7Z8	88 aa		1.07	□□□□□ -2.24
CLU1	YMR012W	REP1	P03871	373 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YAK1	P14680	807 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	STE18	P18852	110 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YPK2	P18961	677 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	TYR1	P20049	452 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	CMK2	P22517	447 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	GIT1	P25346	518 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YMC2	P38087	329 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	BZZ1	P38822	633 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	LYS1	P38998	373 aa	RIP-Chip data	1.06	□□□□□ -2.24	not detected
CLU1	YMR012W	YER130C	P39959	443 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	SEC9	P40357	651 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YNL260C	P53846	198 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	HSP31	Q04432	237 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	YDR115W	Q04598	105 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	TDH2	P00358	332 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	ADE5,7	P07244	802 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	PET123	P17558	318 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	OAC1	P32332	324 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	ARC19	P33204	171 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	YPT52	P36018	234 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	1.06	□□□□□ -2.24	RIP-Chip
CLU1	YMR012W	RBG1	P39729	369 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	ARG2	P40360	574 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	EFM3	P47163	339 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	SHY1	P53266	389 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	CTL1	Q03220	320 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	AKR2	Q12013	749 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	MSH5	Q12175	901 aa		1.06	□□□□□ -2.24
CLU1	YMR012W	RPL27A	P0C2H6	136 aa	Known RBP	1.06	□□□□□ -2.24
CLU1	YMR012W	RPL27B	P0C2H7	136 aa	Known RBP	1.06	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms