RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	TRP1	P00912	224 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	CDC33	P07260	213 aa	Known RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	RRT12	P25381	491 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	POF1	P25576	258 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	RPL16B	P26785	198 aa	Known RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	YKL063C	P35725	167 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	IRC24	P40580	263 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	GCN20	P43535	752 aa	Known RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	MTM1	P53320	366 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	ALE1	Q08548	619 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	UTP23	Q12339	254 aa	Known RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	UTP10	P42945	1769 aa	Known RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	NDT80	P38830	627 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	RTT101	P47050	842 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	TAD2	P47058	250 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	SRL4	Q03085	281 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	CTR3	Q06686	241 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	YBL111C	Q3E7Y5	667 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	IZH4	Q99393	312 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	INO2	P26798	304 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	ACB1	P31787	87 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	YNL194C	P40169	301 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	RPR2	P40571	144 aa		2.86	□□□□□ -1.95
VIP1	YLR410W	SDO1	Q07953	250 aa	Known RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	RRP42	Q12277	265 aa	Predicted RBP	2.86	□□□□□ -1.95
VIP1	YLR410W	RPL31A	P0C2H8	113 aa	Known RBP	2.85	□□□□□ -1.95
VIP1	YLR410W	MRPL6	P32904	214 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	SPT4	P32914	102 aa	Predicted RBP	2.85	□□□□□ -1.95
VIP1	YLR410W	PRS4	P38063	326 aa	Predicted RBP	2.85	□□□□□ -1.95
VIP1	YLR410W	JLP2	P40206	208 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	GDS1	P41913	522 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	ALG11	P53954	548 aa	Known RBP	2.85	□□□□□ -1.95
VIP1	YLR410W	RPN6	Q12377	434 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	AIM17	P23180	465 aa	Known RBP	2.85	□□□□□ -1.95
VIP1	YLR410W	RIB1	P38066	345 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	PET100	P38958	111 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	MET30	P39014	640 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	TRM82	Q03774	444 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	AUS1	Q08409	1394 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	GRE1	Q08969	168 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	YDL109C	Q12103	647 aa		2.85	□□□□□ -1.95
VIP1	YLR410W	HTZ1	Q12692	134 aa	Known RBP	2.85	□□□□□ -1.95
VIP1	YLR410W	SAL1	D6W196	494 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	CYC3	P06182	269 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	PIS1	P06197	220 aa	Known RBP	2.84	□□□□□ -1.95
VIP1	YLR410W	POX1	P13711	748 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	ZRC1	P20107	442 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	RPL16A	P26784	199 aa	Known RBP	2.84	□□□□□ -1.95
VIP1	YLR410W	DCR2	Q05924	578 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	PCL9	Q12477	304 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	THP2	O13539	261 aa	Known RBP	2.84	□□□□□ -1.95
VIP1	YLR410W	PHA2	P32452	334 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	ARC40	P38328	384 aa	Known RBP	2.84	□□□□□ -1.95
VIP1	YLR410W	YAP3	P38749	330 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	YIL067C	P40514	678 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	MRPS17	Q03246	237 aa	Predicted RBP	2.84	□□□□□ -1.95
VIP1	YLR410W	FCY22	Q12119	530 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	FRE8	Q12209	686 aa		2.84	□□□□□ -1.95
VIP1	YLR410W	RAD5	P32849	1169 aa	Predicted RBP	2.84	□□□□□ -1.96
VIP1	YLR410W	PRP18	P33411	251 aa	Predicted RBP	2.84	□□□□□ -1.96
VIP1	YLR410W	YBR241C	P38142	488 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	ATG12	P38316	186 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	YFL040W	P43562	540 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	YJR012C	P47087	207 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	VBA1	Q04301	562 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	FMP42	Q04991	504 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	TIP41	Q12199	356 aa		2.84	□□□□□ -1.96
VIP1	YLR410W	RPL23A	P0CX41	137 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	RPL23B	P0CX42	137 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	PET8	P38921	284 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	MST27	P53176	234 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	EBS1	Q03466	884 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	PMT2	P31382	759 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	SPO23	P33757	523 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	IDP2	P41939	412 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	SAD1	P43589	448 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	YNL095C	P53932	642 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	REX2	P54964	269 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	SMD2	Q06217	110 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	REP1	P03871	373 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	RPL24B	P24000	155 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	YCR043C	P25361	127 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	PBN1	P25580	416 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	RPC37	P36121	282 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	AVT5	P38176	459 aa		2.83	□□□□□ -1.96
VIP1	YLR410W	SEC13	Q04491	297 aa	Known RBP	2.83	□□□□□ -1.96
VIP1	YLR410W	MRPL20	P22354	195 aa	Predicted RBP	2.82	□□□□□ -1.96
VIP1	YLR410W	SDS24	P38314	527 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	SLX1	P38324	304 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	HAC1	P41546	238 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	CIN2	P46670	268 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	YAR1	P46683	200 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	SCS3	P53012	380 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	NRM1	P53718	249 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	KTR6	P54070	446 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	YPR091C	Q06833	770 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	NDE2	Q07500	545 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	SLM3	Q12093	417 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	GET4	Q12125	312 aa		2.82	□□□□□ -1.96
VIP1	YLR410W	RGT2	Q12300	763 aa		2.82	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms