RNA–Protein interactions for RNA: YLR117C

CLF1, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene CLF1, Length 2,064 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CLF1	YLR117C	SCD5	P34758	872 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	POP8	P38208	133 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	TSL1	P38427	1098 aa	Known RBP	4.45	□□□□□ -1.7
CLF1	YLR117C	SUR2	P38992	349 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	YHC3	P47040	408 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	YJR011C	P47086	261 aa	Predicted RBP	4.45	□□□□□ -1.7
CLF1	YLR117C	CSN12	P47130	423 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	ASK10	P48361	1146 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	AVT4	P50944	713 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	YGR151C	P53287	111 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	FRE4	P53746	719 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	TPS1	Q00764	495 aa	Known RBP	4.45	□□□□□ -1.7
CLF1	YLR117C	AAT1	Q01802	451 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	NUP100	Q02629	959 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	AIM32	Q04689	311 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	YMR253C	Q04835	414 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	NRT1	Q08485	598 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	GPB1	Q08886	897 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	YDR056C	Q12025	205 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	UBX3	Q12229	455 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	NDJ1	Q12366	352 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	ATG5	Q12380	294 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	PRM4	Q12498	284 aa		4.45	□□□□□ -1.7
CLF1	YLR117C	AI3	P03877	415 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	HTS1	P07263	546 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	PUT1	P09368	476 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	DDI2	P0CH63	225 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	DDI3	P0CH64	225 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	HAP3	P13434	144 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	TFS1	P14306	219 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	SAM2	P19358	384 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	TRX2	P22803	104 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	IMG1	P25626	169 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	MRP17	P28778	131 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YKU70	P32807	602 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	TCD2	P36101	447 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	YMC2	P38087	329 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	FAT1	P38225	669 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	NDT80	P38830	627 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	VPS52	P39904	641 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	AYR1	P40471	297 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	PAU15	P40585	124 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	MAF1	P41910	395 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	BUL1	P48524	976 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YDL183C	P48569	320 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	KXD1	P53158	218 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	AAH1	P53909	347 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	NRK1	P53915	240 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	ASI3	P53983	676 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YKR011C	Q02209	353 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	DIG2	Q03373	323 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	YAP6	Q03935	383 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	FIT1	Q04433	528 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	GAS5	Q08193	484 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.44	□□□□□ -1.7	not detected
CLF1	YLR117C	FSH3	Q99369	266 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	GSC2	P40989	1895 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	COX5B	P00425	151 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	HEM2	P05373	342 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	PRB1	P09232	635 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YML003W	P0CF16	290 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	AMD1	P15274	810 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	SNF5	P18480	905 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	ESS1	P22696	170 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	KIN82	P25341	720 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	AGP1	P25376	633 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YCR099C	P25657	155 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	SUA7	P29055	345 aa	Predicted RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	PRE4	P30657	266 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	NTF2	P33331	125 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	SKT5	P34226	696 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	RMA1	P36001	430 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	ADD66	P36040	267 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YKL075C	P36083	450 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	MRPL11	P36521	249 aa	Predicted RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	MGE1	P38523	228 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	DBP8	P38719	431 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	YHR035W	P38769	630 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	PNT1	P38969	423 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	PAC1	P39946	494 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	KTR7	P40504	517 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	GAB1	P41733	394 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	IME4	P41833	600 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	SSU1	P41930	458 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	PMT6	P42934	759 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	MOB2	P43563	287 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	ASN1	P49089	572 aa	Known RBP	4.44	□□□□□ -1.7
CLF1	YLR117C	IBD2	P53892	351 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	RSM10	Q03201	203 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	HED1	Q03937	162 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	REX4	Q08237	289 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	TMS1	Q12116	473 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	PET20	Q99373	253 aa		4.44	□□□□□ -1.7
CLF1	YLR117C	CPR1	P14832	162 aa	Known RBP	4.43	□□□□□ -1.7
CLF1	YLR117C	RPI1	P23250	407 aa	Known RBP	4.43	□□□□□ -1.7
CLF1	YLR117C	TVP38	P36164	337 aa		4.43	□□□□□ -1.7
CLF1	YLR117C	YBR284W	P38150	797 aa		4.43	□□□□□ -1.7
CLF1	YLR117C	YBR096W	P38256	230 aa		4.43	□□□□□ -1.7
CLF1	YLR117C	ARO9	P38840	513 aa	Predicted RBP	4.43	□□□□□ -1.7
CLF1	YLR117C	HAT2	P39984	401 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms