RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YDR209CQ03480 137 aa1.09□□□□□ -2.23
SWI4YER111C RNH1Q04740 348 aa1.09□□□□□ -2.23
SWI4YER111C COX20Q04935 205 aa1.09□□□□□ -2.23
SWI4YER111C APC9Q12107 265 aa1.09□□□□□ -2.23
SWI4YER111C ATP16Q12165 160 aa1.09□□□□□ -2.23
SWI4YER111C YER078W-AQ3E7A2 54 aa1.09□□□□□ -2.23
SWI4YER111C GEA1P47102 1408 aaPredicted RBP1.09□□□□□ -2.23
SWI4YER111C PDR11P40550 1411 aa1.09□□□□□ -2.23
SWI4YER111C RSF2P46974 1380 aa1.09□□□□□ -2.23
SWI4YER111C TDH3P00359 332 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SWI4YER111C HIS1P00498 297 aaKnown RBP1.09□□□□□ -2.23
SWI4YER111C CBS2P14905 389 aa1.09□□□□□ -2.23
SWI4YER111C MET16P18408 261 aaPredicted RBP1.09□□□□□ -2.23
SWI4YER111C YCR016WP25617 290 aaKnown RBP1.09□□□□□ -2.23
SWI4YER111C CPR3P25719 182 aa1.09□□□□□ -2.23
SWI4YER111C NAM9P27929 486 aa1.09□□□□□ -2.23
SWI4YER111C LDS1P31379 325 aa1.09□□□□□ -2.23
SWI4YER111C MSN4P33749 630 aa1.09□□□□□ -2.23
SWI4YER111C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
SWI4YER111C HEM14P40012 539 aa1.09□□□□□ -2.23
SWI4YER111C LSB1P53281 241 aa1.09□□□□□ -2.23
SWI4YER111C OKP1P53298 406 aa1.09□□□□□ -2.23
SWI4YER111C BIO4P53630 237 aa1.09□□□□□ -2.23
SWI4YER111C CWC21Q03375 135 aaKnown RBP1.09□□□□□ -2.23
SWI4YER111C YMR209CQ03648 457 aa1.09□□□□□ -2.23
SWI4YER111C UBX2Q04228 584 aa1.09□□□□□ -2.23
SWI4YER111C YLR177WQ06251 628 aa1.09□□□□□ -2.23
SWI4YER111C RUD3Q12234 484 aaKnown RBP1.09□□□□□ -2.23
SWI4YER111C RPN6Q12377 434 aa1.09□□□□□ -2.23
SWI4YER111C MRPL20P22354 195 aaPredicted RBP1.09□□□□□ -2.24
SWI4YER111C IMP3P32899 183 aaPredicted RBP1.09□□□□□ -2.24
SWI4YER111C YPC1P38298 316 aa1.09□□□□□ -2.24
SWI4YER111C TIM17P39515 158 aa1.09□□□□□ -2.24
SWI4YER111C PAN6P40459 309 aa1.09□□□□□ -2.24
SWI4YER111C MRPL50P53724 139 aa1.09□□□□□ -2.24
SWI4YER111C RNH201P53942 307 aa1.09□□□□□ -2.24
SWI4YER111C PET117Q02771 107 aa1.09□□□□□ -2.24
SWI4YER111C OST6Q03723 332 aa1.09□□□□□ -2.24
SWI4YER111C YDL114WQ07530 308 aa1.09□□□□□ -2.24
SWI4YER111C RDL2Q08742 149 aaKnown RBP1.09□□□□□ -2.24
SWI4YER111C YOR029WQ12243 111 aa1.09□□□□□ -2.24
SWI4YER111C YPR064WQ12492 139 aa1.09□□□□□ -2.24
SWI4YER111C ASP3-2P0CX77 362 aa1.08□□□□□ -2.24
SWI4YER111C ASP3-3P0CX78 362 aa1.08□□□□□ -2.24
SWI4YER111C ASP3-4P0CX79 362 aa1.08□□□□□ -2.24
SWI4YER111C ASP3-1P0CZ17 362 aa1.08□□□□□ -2.24
SWI4YER111C REV1P12689 985 aa1.08□□□□□ -2.24
SWI4YER111C SPT15P13393 240 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C BGL2P15703 313 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C HPR1P17629 752 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C DAL82P21705 255 aa1.08□□□□□ -2.24
SWI4YER111C CMK2P22517 447 aa1.08□□□□□ -2.24
SWI4YER111C AAT2P23542 418 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C GIT1P25346 518 aa1.08□□□□□ -2.24
SWI4YER111C FUN26P31381 517 aa1.08□□□□□ -2.24
SWI4YER111C PMT2P31382 759 aa1.08□□□□□ -2.24
SWI4YER111C CTM1P38818 585 aa1.08□□□□□ -2.24
SWI4YER111C MIG3P39943 394 aa1.08□□□□□ -2.24
SWI4YER111C AIM10P39965 576 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C VEL1P53058 206 aa1.08□□□□□ -2.24
SWI4YER111C TIM11P81449 96 aaPredicted RBP1.08□□□□□ -2.24
SWI4YER111C YPL077CQ02831 240 aa1.08□□□□□ -2.24
SWI4YER111C INP2Q03824 705 aa1.08□□□□□ -2.24
SWI4YER111C CTR3Q06686 241 aa1.08□□□□□ -2.24
SWI4YER111C DTD1Q07648 150 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C PER33Q12144 273 aa1.08□□□□□ -2.24
SWI4YER111C JID1Q12350 301 aa1.08□□□□□ -2.24
SWI4YER111C YBR298C-AQ8TGK4 73 aa1.08□□□□□ -2.24
SWI4YER111C MIR1P23641 311 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C CWP1P28319 239 aa1.08□□□□□ -2.24
SWI4YER111C SUA5P32579 426 aa1.08□□□□□ -2.24
SWI4YER111C SPT4P32914 102 aaPredicted RBP1.08□□□□□ -2.24
SWI4YER111C RCK2P38623 610 aa1.08□□□□□ -2.24
SWI4YER111C BIG1P38813 335 aa1.08□□□□□ -2.24
SWI4YER111C SLM1P40485 686 aa1.08□□□□□ -2.24
SWI4YER111C CDC40P40968 455 aaPredicted RBP1.08□□□□□ -2.24
SWI4YER111C IGD1P43598 195 aa1.08□□□□□ -2.24
SWI4YER111C FMP33P46998 180 aa1.08□□□□□ -2.24
SWI4YER111C KAP114P53067 1004 aa1.08□□□□□ -2.24
SWI4YER111C PEX31P53203 462 aa1.08□□□□□ -2.24
SWI4YER111C RPL21AQ02753 160 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C ENT5Q03769 411 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C YET2Q04210 160 aa1.08□□□□□ -2.24
SWI4YER111C GMC1Q04399 608 aa1.08□□□□□ -2.24
SWI4YER111C YHC1Q05900 231 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C MRX9Q07349 420 aaKnown RBP1.08□□□□□ -2.24
SWI4YER111C MCH1Q07376 486 aa1.08□□□□□ -2.24
SWI4YER111C MFG1Q07684 458 aa1.08□□□□□ -2.24
SWI4YER111C ALE1Q08548 619 aa1.08□□□□□ -2.24
SWI4YER111C YMR230W-AQ3E7B5 62 aa1.08□□□□□ -2.24
SWI4YER111C SRB8P25648 1427 aa1.08□□□□□ -2.24
SWI4YER111C RPL31AP0C2H8 113 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C NTG1P31378 399 aa1.07□□□□□ -2.24
SWI4YER111C NUP2P32499 720 aa1.07□□□□□ -2.24
SWI4YER111C GCG1P32656 232 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C RPT5P33297 434 aaKnown RBP1.07□□□□□ -2.24
SWI4YER111C BMT2P38278 337 aa1.07□□□□□ -2.24
SWI4YER111C SDS24P38314 527 aa1.07□□□□□ -2.24
SWI4YER111C COA1P40452 197 aa1.07□□□□□ -2.24
SWI4YER111C LOC1P43586 204 aaPredicted RBP1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms