RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C MRX4Q12467 430 aa1.01□□□□□ -2.25
VAM6YDL077C RRI1Q12468 440 aa1.01□□□□□ -2.25
VAM6YDL077C GLT1Q12680 2145 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C VMA9Q3E7B6 73 aa1.01□□□□□ -2.25
VAM6YDL077C MHF2Q3E829 80 aa1.01□□□□□ -2.25
VAM6YDL077C YBR298C-AQ8TGK4 73 aa1.01□□□□□ -2.25
VAM6YDL077C MDM12Q92328 271 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-DR3Q99303 438 aa1.01□□□□□ -2.25
VAM6YDL077C YDR157WA0A023PZE8 133 aa1.01□□□□□ -2.25
VAM6YDL077C COX5BP00425 151 aa1.01□□□□□ -2.25
VAM6YDL077C MSW1P04803 379 aa1.01□□□□□ -2.25
VAM6YDL077C ARG81P05085 880 aa1.01□□□□□ -2.25
VAM6YDL077C ILV5P06168 395 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C CYC3P06182 269 aa1.01□□□□□ -2.25
VAM6YDL077C HIS5P07172 385 aa1.01□□□□□ -2.25
VAM6YDL077C COX9P07255 59 aa1.01□□□□□ -2.25
VAM6YDL077C RIP1P08067 215 aa1.01□□□□□ -2.25
VAM6YDL077C DDI2P0CH63 225 aa1.01□□□□□ -2.25
VAM6YDL077C DDI3P0CH64 225 aa1.01□□□□□ -2.25
VAM6YDL077C ERR1P0CX10 437 aa1.01□□□□□ -2.25
VAM6YDL077C ERR2P0CX11 437 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-FP0CX61 438 aa1.01□□□□□ -2.25
VAM6YDL077C TY2A-GR2P0CX62 438 aa1.01□□□□□ -2.25
VAM6YDL077C TIR1P10863 254 aa1.01□□□□□ -2.25
VAM6YDL077C SPO7P18410 259 aa1.01□□□□□ -2.25
VAM6YDL077C ANB1P19211 157 aa1.01□□□□□ -2.25
VAM6YDL077C MAK32P23060 363 aa1.01□□□□□ -2.25
VAM6YDL077C MIR1P23641 311 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C DAL2P25335 343 aa1.01□□□□□ -2.25
VAM6YDL077C PUT3P25502 979 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C SGF29P25554 259 aa1.01□□□□□ -2.25
VAM6YDL077C AHC2P25649 128 aa1.01□□□□□ -2.25
VAM6YDL077C IDH2P28241 369 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C ARO2P28777 376 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C CTS1P29029 562 aa1.01□□□□□ -2.25
VAM6YDL077C OCH1P31755 480 aa1.01□□□□□ -2.25
VAM6YDL077C HEM12P32347 362 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C DAL3P32459 195 aa1.01□□□□□ -2.25
VAM6YDL077C COT1P32798 439 aa1.01□□□□□ -2.25
VAM6YDL077C UGP1P32861 499 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C SFC1P33303 322 aa1.01□□□□□ -2.25
VAM6YDL077C SSS1P35179 80 aa1.01□□□□□ -2.25
VAM6YDL077C GEX2P36173 615 aa1.01□□□□□ -2.25
VAM6YDL077C SDH4P37298 181 aa1.01□□□□□ -2.25
VAM6YDL077C PBP2P38151 413 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
VAM6YDL077C SHE3P38272 425 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C YBR197CP38306 217 aa1.01□□□□□ -2.25
VAM6YDL077C PCM1P38628 557 aaKnown RBP1.01□□□□□ -2.25
VAM6YDL077C LAG1P38703 411 aa1.01□□□□□ -2.25
VAM6YDL077C YHR035WP38769 630 aa1.01□□□□□ -2.25
VAM6YDL077C YHR054CP38780 354 aa1.01□□□□□ -2.25
VAM6YDL077C UBA4P38820 440 aa1.01□□□□□ -2.25
VAM6YDL077C SRP14P38985 146 aa1.01□□□□□ -2.25
VAM6YDL077C YAR028WP39548 234 aa1.01□□□□□ -2.25
VAM6YDL077C BOL3P39724 118 aa1.01□□□□□ -2.25
VAM6YDL077C GCV3P39726 170 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C YER010CP40011 234 aa1.01□□□□□ -2.25
VAM6YDL077C PEP8P40335 379 aa1.01□□□□□ -2.25
VAM6YDL077C LAS21P40367 830 aa1.01□□□□□ -2.25
VAM6YDL077C OPT1P40897 799 aa1.01□□□□□ -2.25
VAM6YDL077C GAB1P41733 394 aa1.01□□□□□ -2.25
VAM6YDL077C ERR3P42222 437 aa1.01□□□□□ -2.25
VAM6YDL077C MRPS18P42847 217 aa1.01□□□□□ -2.25
VAM6YDL077C PMT6P42934 759 aa1.01□□□□□ -2.25
VAM6YDL077C YFL040WP43562 540 aa1.01□□□□□ -2.25
VAM6YDL077C PET130P47065 347 aa1.01□□□□□ -2.25
VAM6YDL077C YJR011CP47086 261 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C STE24P47154 453 aa1.01□□□□□ -2.25
VAM6YDL077C EFM3P47163 339 aa1.01□□□□□ -2.25
VAM6YDL077C DAN1P47178 298 aa1.01□□□□□ -2.25
VAM6YDL077C PMT3P47190 753 aa1.01□□□□□ -2.25
VAM6YDL077C NIT3P49954 291 aa1.01□□□□□ -2.25
VAM6YDL077C YGL159WP53110 370 aa1.01□□□□□ -2.25
VAM6YDL077C FLC3P53121 802 aa1.01□□□□□ -2.25
VAM6YDL077C SGF73P53165 657 aa1.01□□□□□ -2.25
VAM6YDL077C YGR012WP53206 393 aa1.01□□□□□ -2.25
VAM6YDL077C MTL1P53214 551 aa1.01□□□□□ -2.25
VAM6YDL077C HOL1P53389 586 aa1.01□□□□□ -2.25
VAM6YDL077C YNR064CP53750 290 aa1.01□□□□□ -2.25
VAM6YDL077C YAT1P80235 687 aa1.01□□□□□ -2.25
VAM6YDL077C PRP38Q00723 242 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C STP1Q00947 519 aa1.01□□□□□ -2.25
VAM6YDL077C RPA49Q01080 415 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C SPR6Q01684 191 aa1.01□□□□□ -2.25
VAM6YDL077C EKI1Q03764 534 aa1.01□□□□□ -2.25
VAM6YDL077C RIM13Q03792 727 aa1.01□□□□□ -2.25
VAM6YDL077C YMR166CQ03829 368 aa1.01□□□□□ -2.25
VAM6YDL077C AVO2Q04749 426 aa1.01□□□□□ -2.25
VAM6YDL077C YDR222WQ04925 415 aa1.01□□□□□ -2.25
VAM6YDL077C YMR034CQ05131 434 aaPredicted RBP1.01□□□□□ -2.25
VAM6YDL077C COQ11Q05892 277 aa1.01□□□□□ -2.25
VAM6YDL077C ATG39Q06159 398 aa1.01□□□□□ -2.25
VAM6YDL077C PEX30Q06169 523 aa1.01□□□□□ -2.25
VAM6YDL077C TPO3Q06451 622 aa1.01□□□□□ -2.25
VAM6YDL077C BSP1Q06604 576 aa1.01□□□□□ -2.25
VAM6YDL077C CDA2Q06703 312 aa1.01□□□□□ -2.25
VAM6YDL077C PUN1Q06991 263 aa1.01□□□□□ -2.25
VAM6YDL077C SHS1Q07657 551 aa1.01□□□□□ -2.25
VAM6YDL077C PSR2Q07949 397 aa1.01□□□□□ -2.25
VAM6YDL077C THP1Q08231 455 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 176.7 ms