RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YFR010W-AP0C5N0 62 aa5.04□□□□□ -1.6
SHM1YBR263W ENA1P13587 1091 aa5.04□□□□□ -1.6
SHM1YBR263W SNF6P18888 332 aa5.04□□□□□ -1.6
SHM1YBR263W ACP1P32463 125 aa5.04□□□□□ -1.6
SHM1YBR263W TRS65P32893 560 aa5.04□□□□□ -1.6
SHM1YBR263W JEN1P36035 616 aa5.04□□□□□ -1.6
SHM1YBR263W RTC2P38279 296 aa5.04□□□□□ -1.6
SHM1YBR263W ISC1P40015 477 aaKnown RBP5.04□□□□□ -1.6
SHM1YBR263W REE1P40893 198 aa5.04□□□□□ -1.6
SHM1YBR263W BPL1P48445 690 aaPredicted RBP5.04□□□□□ -1.6
SHM1YBR263W MPP6P53725 186 aaPredicted RBP5.04□□□□□ -1.6
SHM1YBR263W ENA2Q01896 1091 aa5.04□□□□□ -1.6
SHM1YBR263W FDC1Q03034 503 aa5.04□□□□□ -1.6
SHM1YBR263W SDC1Q03323 175 aa5.04□□□□□ -1.6
SHM1YBR263W ELP6Q04868 273 aa5.04□□□□□ -1.6
SHM1YBR263W NTG2Q08214 380 aa5.04□□□□□ -1.6
SHM1YBR263W RLM1Q12224 676 aa5.04□□□□□ -1.6
SHM1YBR263W ENA5Q12691 1091 aa5.04□□□□□ -1.6
SHM1YBR263W YDL007C-AQ2V2Q0 85 aa5.04□□□□□ -1.6
SHM1YBR263W FLO9P39712 1322 aa5.03□□□□□ -1.6
SHM1YBR263W SEN2P16658 377 aa5.03□□□□□ -1.6
SHM1YBR263W RPB8P20436 146 aa5.03□□□□□ -1.6
SHM1YBR263W AIM17P23180 465 aaKnown RBP5.03□□□□□ -1.6
SHM1YBR263W PRE2P30656 287 aaKnown RBP5.03□□□□□ -1.6
SHM1YBR263W SLC1P33333 303 aa5.03□□□□□ -1.6
SHM1YBR263W GPX1P36014 167 aa5.03□□□□□ -1.6
SHM1YBR263W YBR138CP38277 524 aa5.03□□□□□ -1.6
SHM1YBR263W APD1P38281 316 aa5.03□□□□□ -1.6
SHM1YBR263W PDS1P40316 373 aaPredicted RBP5.03□□□□□ -1.6
SHM1YBR263W GVP36P40531 326 aaKnown RBP5.03□□□□□ -1.6
SHM1YBR263W STB1P42845 420 aa5.03□□□□□ -1.6
SHM1YBR263W SWP82P43554 623 aa5.03□□□□□ -1.6
SHM1YBR263W IRC7P43623 340 aa5.03□□□□□ -1.6
SHM1YBR263W YGL101WP53144 215 aa5.03□□□□□ -1.6
SHM1YBR263W DML1Q03652 475 aa5.03□□□□□ -1.6
SHM1YBR263W YMD8Q03697 442 aa5.03□□□□□ -1.6
SHM1YBR263W NNT1Q05874 261 aa5.03□□□□□ -1.6
SHM1YBR263W YLR345WQ06137 509 aa5.03□□□□□ -1.6
SHM1YBR263W YDL218WQ07629 317 aa5.03□□□□□ -1.6
SHM1YBR263W COQ10Q08058 207 aa5.03□□□□□ -1.6
SHM1YBR263W RDL2Q08742 149 aaKnown RBP5.03□□□□□ -1.6
SHM1YBR263W UIP4Q08926 304 aa5.03□□□□□ -1.6
SHM1YBR263W YOR343CQ12484 108 aa5.03□□□□□ -1.6
SHM1YBR263W SET6Q12529 373 aa5.03□□□□□ -1.6
SHM1YBR263W NUP1P20676 1076 aa5.02□□□□□ -1.61
SHM1YBR263W PRP28P23394 588 aa5.02□□□□□ -1.61
SHM1YBR263W OAC1P32332 324 aa5.02□□□□□ -1.61
SHM1YBR263W PRP21P32524 280 aaPredicted RBP5.02□□□□□ -1.61
SHM1YBR263W SSE2P32590 693 aaKnown RBP5.02□□□□□ -1.61
SHM1YBR263W MSN4P33749 630 aa5.02□□□□□ -1.61
SHM1YBR263W NIC96P34077 839 aa5.02□□□□□ -1.61
SHM1YBR263W LHS1P36016 881 aa5.02□□□□□ -1.61
SHM1YBR263W YKL071WP36086 256 aa5.02□□□□□ -1.61
SHM1YBR263W APE4P38821 490 aa5.02□□□□□ -1.61
SHM1YBR263W EGD2P38879 174 aaKnown RBP5.02□□□□□ -1.61
SHM1YBR263W SOP4P39543 234 aaPredicted RBP5.02□□□□□ -1.61
SHM1YBR263W RTT105P40063 208 aa5.02□□□□□ -1.61
SHM1YBR263W SHO1P40073 367 aa5.02□□□□□ -1.61
SHM1YBR263W IDS2P46958 469 aa5.02□□□□□ -1.61
SHM1YBR263W UBX6P47049 396 aa5.02□□□□□ -1.61
SHM1YBR263W SLD3P53135 668 aa5.02□□□□□ -1.61
SHM1YBR263W YGR126WP53274 230 aa5.02□□□□□ -1.61
SHM1YBR263W GRX5Q02784 150 aa5.02□□□□□ -1.61
SHM1YBR263W YPL039WQ03080 316 aa5.02□□□□□ -1.61
SHM1YBR263W SCS7Q03529 384 aa5.02□□□□□ -1.61
SHM1YBR263W OST6Q03723 332 aa5.02□□□□□ -1.61
SHM1YBR263W MRPL1Q04599 285 aa5.02□□□□□ -1.61
SHM1YBR263W SNO4Q04902 237 aa5.02□□□□□ -1.61
SHM1YBR263W UTP21Q06078 939 aaPredicted RBP5.02□□□□□ -1.61
SHM1YBR263W HSP33Q08914 237 aaKnown RBP5.02□□□□□ -1.61
SHM1YBR263W YPL191CQ08930 360 aa5.02□□□□□ -1.61
SHM1YBR263W GRE1Q08969 168 aa5.02□□□□□ -1.61
SHM1YBR263W HSP32Q08992 237 aa5.02□□□□□ -1.61
SHM1YBR263W RTC5Q12108 567 aaKnown RBP5.02□□□□□ -1.61
SHM1YBR263W SIA1Q12212 622 aa5.02□□□□□ -1.61
SHM1YBR263W PST2Q12335 198 aaKnown RBP5.02□□□□□ -1.61
SHM1YBR263W Q0144Q9ZZW2 109 aa5.02□□□□□ -1.61
SHM1YBR263W MDH2P22133 377 aa5.01□□□□□ -1.61
SHM1YBR263W KRR1P25586 316 aaPredicted RBP5.01□□□□□ -1.61
SHM1YBR263W ERG9P29704 444 aa5.01□□□□□ -1.61
SHM1YBR263W YEF1P32622 495 aa5.01□□□□□ -1.61
SHM1YBR263W DUT1P33317 147 aa5.01□□□□□ -1.61
SHM1YBR263W HIS7P33734 552 aaKnown RBP5.01□□□□□ -1.61
SHM1YBR263W SSZ1P38788 538 aaKnown RBP5.01□□□□□ -1.61
SHM1YBR263W CHL4P38907 458 aa5.01□□□□□ -1.61
SHM1YBR263W GDI1P39958 451 aaKnown RBP5.01□□□□□ -1.61
SHM1YBR263W MNN5P46982 586 aa5.01□□□□□ -1.61
SHM1YBR263W RPN14P53196 417 aa5.01□□□□□ -1.61
SHM1YBR263W YGR066CP53242 292 aa5.01□□□□□ -1.61
SHM1YBR263W OGG1P53397 376 aaPredicted RBP5.01□□□□□ -1.61
SHM1YBR263W YLR352WQ06479 807 aa5.01□□□□□ -1.61
SHM1YBR263W MDM36Q06820 579 aa5.01□□□□□ -1.61
SHM1YBR263W IRC19Q07843 230 aa5.01□□□□□ -1.61
SHM1YBR263W HRT1Q08273 121 aa5.01□□□□□ -1.61
SHM1YBR263W YOR289WQ12012 251 aaPredicted RBP5.01□□□□□ -1.61
SHM1YBR263W YIL002W-AQ3E7Z5 69 aa5.01□□□□□ -1.61
SHM1YBR263W YAL064W-BO13512 126 aa5□□□□□ -1.61
SHM1YBR263W PEP4P07267 405 aaKnown RBP5□□□□□ -1.61
SHM1YBR263W STE12P13574 688 aa5□□□□□ -1.61
SHM1YBR263W PDX1P16451 410 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms