RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W PCL9Q12477 304 aa2.56□□□□□ -2
SWD3YBR175W NUP159P40477 1460 aa2.56□□□□□ -2
SWD3YBR175W HTB1P02293 131 aaKnown RBP2.55□□□□□ -2
SWD3YBR175W HTB2P02294 131 aa2.55□□□□□ -2
SWD3YBR175W REP1P03871 373 aa2.55□□□□□ -2
SWD3YBR175W YER190C-BP0CX94 160 aa2.55□□□□□ -2
SWD3YBR175W YEL077W-AP0CX95 160 aa2.55□□□□□ -2
SWD3YBR175W YGR296C-BP0CX96 160 aa2.55□□□□□ -2
SWD3YBR175W YPL283W-BP0CX97 160 aa2.55□□□□□ -2
SWD3YBR175W YPR204C-AP0CX98 160 aa2.55□□□□□ -2
SWD3YBR175W TFS1P14306 219 aa2.55□□□□□ -2
SWD3YBR175W RPL16AP26784 199 aaKnown RBP2.55□□□□□ -2
SWD3YBR175W ATP7P30902 174 aa2.55□□□□□ -2
SWD3YBR175W NDC1P32500 655 aa2.55□□□□□ -2
SWD3YBR175W SPO23P33757 523 aa2.55□□□□□ -2
SWD3YBR175W YKL187CP34231 750 aa2.55□□□□□ -2
SWD3YBR175W AVT5P38176 459 aa2.55□□□□□ -2
SWD3YBR175W NUP170P38181 1502 aa2.55□□□□□ -2
SWD3YBR175W ECM8P38246 354 aa2.55□□□□□ -2
SWD3YBR175W BMT2P38278 337 aa2.55□□□□□ -2
SWD3YBR175W SDS24P38314 527 aa2.55□□□□□ -2
SWD3YBR175W UTP18P40362 594 aaPredicted RBP2.55□□□□□ -2
SWD3YBR175W YIL001WP40560 513 aa2.55□□□□□ -2
SWD3YBR175W LCB3P47013 409 aa2.55□□□□□ -2
SWD3YBR175W YJR012CP47087 207 aa2.55□□□□□ -2
SWD3YBR175W MRM2P53123 320 aa2.55□□□□□ -2
SWD3YBR175W VHT1P53241 593 aa2.55□□□□□ -2
SWD3YBR175W NOP19P53317 196 aaPredicted RBP2.55□□□□□ -2
SWD3YBR175W MTM1P53320 366 aa2.55□□□□□ -2
SWD3YBR175W YNL040WP53960 456 aaPredicted RBP2.55□□□□□ -2
SWD3YBR175W DIA1P54005 336 aa2.55□□□□□ -2
SWD3YBR175W RPL15BP54780 204 aaPredicted RBP2.55□□□□□ -2
SWD3YBR175W TRM82Q03774 444 aa2.55□□□□□ -2
SWD3YBR175W PRM6Q04705 352 aa2.55□□□□□ -2
SWD3YBR175W TAZ1Q06510 381 aa2.55□□□□□ -2
SWD3YBR175W CDD1Q06549 142 aa2.55□□□□□ -2
SWD3YBR175W SLM3Q12093 417 aa2.55□□□□□ -2
SWD3YBR175W YPR064WQ12492 139 aa2.55□□□□□ -2
SWD3YBR175W YDR157WA0A023PZE8 133 aa2.54□□□□□ -2
SWD3YBR175W RPP0P05317 312 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W PIS1P06197 220 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W NAM2P11325 894 aa2.54□□□□□ -2
SWD3YBR175W CTA1P15202 515 aa2.54□□□□□ -2
SWD3YBR175W ERD1P16151 362 aa2.54□□□□□ -2
SWD3YBR175W AIM17P23180 465 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W CHA1P25379 360 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W YCR102CP25608 368 aa2.54□□□□□ -2
SWD3YBR175W NAM9P27929 486 aa2.54□□□□□ -2
SWD3YBR175W IDH1P28834 360 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SWD3YBR175W SPS19P32573 292 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W PDC2P32896 925 aa2.54□□□□□ -2
SWD3YBR175W SPT4P32914 102 aaPredicted RBP2.54□□□□□ -2
SWD3YBR175W GDH2P33327 1092 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W NAT2P37293 288 aa2.54□□□□□ -2
SWD3YBR175W YBR241CP38142 488 aa2.54□□□□□ -2
SWD3YBR175W MIX23P38162 196 aa2.54□□□□□ -2
SWD3YBR175W SOP4P39543 234 aaPredicted RBP2.54□□□□□ -2
SWD3YBR175W SEC72P39742 193 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W SMB1P40018 196 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W YJR079WP47126 109 aa2.54□□□□□ -2
SWD3YBR175W GET1P53192 235 aa2.54□□□□□ -2
SWD3YBR175W PEX31P53203 462 aa2.54□□□□□ -2
SWD3YBR175W MAL13P53338 473 aa2.54□□□□□ -2
SWD3YBR175W YNL095CP53932 642 aa2.54□□□□□ -2
SWD3YBR175W RPM2Q02773 1202 aa2.54□□□□□ -2
SWD3YBR175W EBS1Q03466 884 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W SFH1Q06168 426 aa2.54□□□□□ -2
SWD3YBR175W LOT6Q07923 191 aa2.54□□□□□ -2
SWD3YBR175W PLB3Q08108 686 aa2.54□□□□□ -2
SWD3YBR175W YDL109CQ12103 647 aa2.54□□□□□ -2
SWD3YBR175W FRE8Q12209 686 aa2.54□□□□□ -2
SWD3YBR175W EAF3Q12432 401 aa2.54□□□□□ -2
SWD3YBR175W HTZ1Q12692 134 aaKnown RBP2.54□□□□□ -2
SWD3YBR175W YCL012CQ8J0M4 134 aa2.54□□□□□ -2
SWD3YBR175W RPL23AP0CX41 137 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W RPL23BP0CX42 137 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W RNA14P25298 677 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W RFA3P26755 122 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W INO2P26798 304 aa2.53□□□□□ -2
SWD3YBR175W DEP1P31385 405 aa2.53□□□□□ -2
SWD3YBR175W QRI5P32344 111 aa2.53□□□□□ -2
SWD3YBR175W TRS65P32893 560 aa2.53□□□□□ -2
SWD3YBR175W PMU1P36069 295 aa2.53□□□□□ -2
SWD3YBR175W ATG12P38316 186 aa2.53□□□□□ -2
SWD3YBR175W MTC4P38335 694 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W YAT2P40017 923 aa2.53□□□□□ -2
SWD3YBR175W YIL029CP40538 142 aa2.53□□□□□ -2
SWD3YBR175W ERG10P41338 398 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W DIM1P41819 318 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W CIN2P46670 268 aa2.53□□□□□ -2
SWD3YBR175W YPT32P51996 222 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W USE1P53146 245 aa2.53□□□□□ -2
SWD3YBR175W GOR1P53839 350 aa2.53□□□□□ -2
SWD3YBR175W IBD2P53892 351 aa2.53□□□□□ -2
SWD3YBR175W ASI3P53983 676 aa2.53□□□□□ -2
SWD3YBR175W TRM44Q02648 567 aaKnown RBP2.53□□□□□ -2
SWD3YBR175W TDA1Q03533 586 aa2.53□□□□□ -2
SWD3YBR175W YMR010WQ03687 405 aa2.53□□□□□ -2
SWD3YBR175W FAR8Q05040 523 aa2.53□□□□□ -2
SWD3YBR175W GRE1Q08969 168 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms