RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ADGRA3Q8IWK6 1321 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 H3BRB1 525 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 GAS2O43903 313 aaKnown RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 PPFIA4O75335 1185 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TADA3O75528 432 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TBC1D8O95759 1140 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TUBBP07437 444 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 MMP3P08254 477 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 HOXC6P09630 235 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 INSRRP14616 1297 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 SNRPFP62306 86 aaKnown RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 DRP2Q13474 957 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TFDP1Q14186 410 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 MYBPC2Q14324 1141 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TMEM132AQ24JP5 1023 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 BRDTQ58F21 947 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 FIGNQ5HY92 759 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 OLFML2BQ68BL8 750 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 EFCAB12Q6NXP0 572 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TLK2Q86UE8 772 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 RHPN2Q8IUC4 686 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 SLC9A9Q8IVB4 645 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 MAP4K3Q8IVH8 894 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 OR8K1Q8NGG5 319 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 PRPF31Q8WWY3 499 aaKnown RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 USP6NLQ92738 828 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 SAAL1Q96ER3 474 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 CEP89Q96ST8 783 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 NTPCRQ9BSD7 190 aaKnown RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 TUT1Q9H6E5 874 aaKnown RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 ABHD10Q9NUJ1 306 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 AGPAT5Q9NUQ2 364 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 SUCLA2Q9P2R7 463 aaPredicted RBP9.65□□□□□ -0.86
PHGDH-219ENST00000641513 GJD2Q9UKL4 321 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 CAPN11Q9UMQ6 739 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 SIK3Q9Y2K2 1263 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 MRFAP1Q9Y605 127 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
PHGDH-219ENST00000641513 CITO14578 2027 aa9.65□□□□□ -0.87
PHGDH-219ENST00000641513 SOWAHDA6NJG2 315 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 RNF225M0QZC1 329 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 ADCY6O43306 1168 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 MYL3P08590 195 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 TRIM49P0CI25 452 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 TRIM49CP0CI26 452 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 ZNF865P0CJ78 1059 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 KLRC1P26715 233 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CTGFP29279 349 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CNGA1P29973 690 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CASQ1P31415 396 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 APLP1P51693 650 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CLCN3P51790 818 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 LACTBP83111 547 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 ZBED6P86452 979 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 LAMTOR4Q0VGL1 99 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 KCNMA1Q12791 1236 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CAPSQ13938 189 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 MXD4Q14582 209 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 MFSD14CQ5VZR4 134 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CYP26C1Q6V0L0 522 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 GBP6Q6ZN66 633 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 REM2Q8IYK8 340 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 MNS1Q8NEH6 495 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 UBXN4Q92575 508 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 RABGGTAQ92696 567 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 LENG1Q96BZ8 264 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 ZBTB10Q96DT7 871 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 ZNF668Q96K58 619 aaPredicted RBP9.64□□□□□ -0.87
PHGDH-219ENST00000641513 NLRP4Q96MN2 994 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 NLRC4Q9NPP4 1024 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 ARHGAP28Q9P2N2 729 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 GABRQQ9UN88 632 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 TRIP11Q15643 1979 aa9.64□□□□□ -0.87
PHGDH-219ENST00000641513 COL1A2P08123 1366 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 A0A1W2PQJ5 194 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 RASSF10A6NK89 507 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 ZBTB42B2RXF5 422 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 MAGEB2O15479 319 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 ADCY3O60266 1144 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 KIF5CO60282 957 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 TRPA1O75762 1119 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 C22orf31O95567 290 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 GJB1P08034 283 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
PHGDH-219ENST00000641513 SCP2P22307 547 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 TMOD1P28289 359 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 VAMP7P51809 220 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 EFNA5P52803 228 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 POLR2FP61218 127 aaKnown RBP9.63□□□□□ -0.87
PHGDH-219ENST00000641513 CDK17Q00537 523 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 MYL7Q01449 175 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 SP3Q02447 781 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 BFSP1Q12934 665 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 PPFIA1Q13136 1202 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 BMS1Q14692 1282 aaKnown RBP9.63□□□□□ -0.87
PHGDH-219ENST00000641513 ELF2Q15723 593 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 GRIK4Q16099 956 aa9.63□□□□□ -0.87
PHGDH-219ENST00000641513 EXOC3L4Q17RC7 722 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 243.9 ms