RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PGM2Q96G03 612 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 HES6Q96HZ4 224 aa14.77□□□□□ -0.04
SCARB2-227ENST00000640957 SUCLA2Q9P2R7 463 aaPredicted RBP14.77□□□□□ -0.04
SCARB2-227ENST00000640957 MTRF1LQ9UGC7 380 aaKnown RBP14.77□□□□□ -0.04
SCARB2-227ENST00000640957 ADAMTSL3P82987 1691 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L15C9J2P7 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L13C9JLJ4 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L11C9JVI0 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L18D6R9N7 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L22D6RA61 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L17D6RBQ6 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L19D6RCP7 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L20D6RJB6 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 PEX11AO75192 247 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 AGTP01019 485 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 PYGMP11217 842 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 SCNN1BP51168 640 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L24Q0WX57 530 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 USP17L6PQ6QN14 398 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 SFR1Q86XK3 245 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 LMNTD2Q8IXW0 634 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 B4GALNT2Q8NHY0 566 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 TXLNGYQ9BZA5 131 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 STXBP5LQ9Y2K9 1186 aa14.77□□□□□ -0.05
SCARB2-227ENST00000640957 AFPP02771 609 aaKnown RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 POLD1P28340 1107 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 PRPHP41219 470 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 CYP2J2P51589 502 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 CACNB3P54284 484 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 TCP10Q12799 353 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 DRAP1Q14919 205 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 GALNTL6Q49A17 601 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 MFSD14BQ5SR56 506 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 TAOK1Q7L7X3 1001 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 CENPTQ96BT3 561 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 TBC1D10AQ9BXI6 508 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 ANKRD2Q9GZV1 360 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 NT5C3AQ9H0P0 336 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 NUCKS1Q9H1E3 243 aaKnown RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 C2orf71A6NGG8 1288 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 POC1B-GALNT4F8VUJ3 575 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 EDIL3O43854 480 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 GCNT3O95395 438 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 CHRNB2P17787 502 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 GBP1P32455 592 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 CPA2P48052 419 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 GTF2IP78347 998 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 GRM4Q14833 912 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 DOK7Q18PE1 504 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 KHDC1Q4VXA5 237 aaKnown RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 TBC1D16Q8TBP0 767 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 MTA3Q9BTC8 594 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 HEMGNQ9BXL5 484 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 DENND2DQ9H6A0 471 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 RXFP1Q9HBX9 757 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 STRCP1A6NGW2 1772 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 ALADP13716 330 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 STAT1P42224 750 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 CWF19L1Q69YN2 538 aaKnown RBP14.76□□□□□ -0.05
SCARB2-227ENST00000640957 DNAJC9Q8WXX5 260 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 IQCDQ96DY2 449 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 TRIM7Q9C029 511 aa14.76□□□□□ -0.05
SCARB2-227ENST00000640957 ZBTB39O15060 712 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 TPBGLP0DKB5 382 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 TNFAIP3P21580 790 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 GNA11P29992 359 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 SERPINB4P48594 390 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 CEP120Q8N960 986 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 NYXQ9GZU5 481 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 RNPEPL1Q9HAU8 725 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 DDX25Q9UHL0 483 aaKnown RBP14.75□□□□□ -0.05
SCARB2-227ENST00000640957 PHRF1Q9P1Y6 1649 aaKnown RBP14.75□□□□□ -0.05
SCARB2-227ENST00000640957 CLDN3O15551 220 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 CALB2P22676 271 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 SP100P23497 879 aaPredicted RBP14.75□□□□□ -0.05
SCARB2-227ENST00000640957 PEX5P50542 639 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 LRRC36Q1X8D7 754 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 TTBK2Q6IQ55 1244 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 DSTYKQ6XUX3 929 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 CCDC65Q8IXS2 484 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 PCMTD2Q9NV79 361 aa14.75□□□□□ -0.05
SCARB2-227ENST00000640957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 THAP12O43422 761 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 KRT36O76013 467 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 UNC5CO95185 931 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 NUDT17P0C025 328 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 CALCOCO2Q13137 446 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 GRIPAP1Q4V328 841 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 FBXO33Q7Z6M2 555 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 RASGEF1CQ8N431 466 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 KLF6Q99612 283 aaPredicted RBP14.74□□□□□ -0.05
SCARB2-227ENST00000640957 RASAL2Q9UJF2 1139 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 USP21Q9UK80 565 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 DNAJC12Q9UKB3 198 aa14.74□□□□□ -0.05
SCARB2-227ENST00000640957 CHKBQ9Y259 395 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms