RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 LINC01599Q8WXQ3 324 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 FGF14Q92915 247 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ATP6V0A1Q93050 837 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 CCDC17Q96LX7 622 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 AVENQ9NQS1 362 aaPredicted RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 PCOLCE2Q9UKZ9 415 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SLC8A2Q9UPR5 921 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 TLN1Q9Y490 2541 aaKnown RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 EML5Q05BV3 1969 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 HNRNPRO43390 633 aaKnown RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 PPFIA3O75145 1194 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 HNRNPA1P09651 372 aaKnown RBP eCLIP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 CD1EP15812 388 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 HOXA9P31269 272 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ZAP70P43403 619 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ALDH5A1P51649 535 aaPredicted RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 GFPT1Q06210 699 aaPredicted RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 LAMC2Q13753 1193 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 TMEM259Q4ZIN3 620 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 FBXO47Q5MNV8 452 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 TTC39AQ5SRH9 613 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 PARM1Q6UWI2 310 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 DHX37Q8IY37 1157 aaKnown RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 LSMEM2Q8N112 164 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 DNERQ8NFT8 737 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 DEPDC1BQ8WUY9 529 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 TATDN2Q93075 761 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ZNF707Q96C28 371 aaPredicted RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 PLEKHF1Q96S99 279 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 SGPP1Q9BX95 441 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 MRPL9Q9BYD2 267 aaKnown RBP4.16□□□□□ -1.74
CCDC7-213ENST00000639290 BRD9Q9H8M2 597 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 CAPN10Q9HC96 672 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 PRM3Q9NNZ6 103 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 GDE1Q9NZC3 331 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 CHMP3Q9Y3E7 222 aa4.16□□□□□ -1.74
CCDC7-213ENST00000639290 ADAMTS9Q9P2N4 1935 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 CCDC195A0A1B0GUA6 201 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 PI4KAP2A4QPH2 592 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 TBKBP1A7MCY6 615 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 PPFIA4O75335 1185 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 ARHGAP1Q07960 439 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 NFX1Q12986 1120 aaKnown RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 BYSLQ13895 437 aaKnown RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 CWF19L2Q2TBE0 894 aaKnown RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 PAN2Q504Q3 1202 aaKnown RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 KIAA1755Q5JYT7 1200 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 CCDC62Q6P9F0 684 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 PI4KAP1Q8N8J0 262 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 SH3RF3Q8TEJ3 882 aaPredicted RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 TTPALQ9BTX7 342 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 GDPD2Q9HCC8 539 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 TYW1Q9NV66 732 aaKnown RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 TMEM161AQ9NX61 479 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 CYP39A1Q9NYL5 469 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 TUBD1Q9UJT1 453 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 FEM1BQ9UK73 627 aa4.15□□□□□ -1.74
CCDC7-213ENST00000639290 NDRG2Q9UN36 371 aaKnown RBP4.15□□□□□ -1.74
CCDC7-213ENST00000639290 PLXND1Q9Y4D7 1925 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 ASXL3Q9C0F0 2248 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 SETD2Q9BYW2 2564 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-213ENST00000639290 DXOO77932 396 aaKnown RBP4.15□□□□□ -1.75
CCDC7-213ENST00000639290 MICAL2O94851 1124 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 APBB3O95704 486 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 CYP2E1P05181 493 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-213ENST00000639290 TXNP10599 105 aaKnown RBP4.15□□□□□ -1.75
CCDC7-213ENST00000639290 RFC5P40937 340 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 ATP8B2P98198 1209 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 CREMQ03060 361 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 GABPAQ06546 454 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 NCAPHQ15003 741 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 LAPTM4AQ15012 233 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 USP39Q53GS9 565 aaKnown RBP4.15□□□□□ -1.75
CCDC7-213ENST00000639290 IGF2-ASQ6U949 168 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 GET4Q7L5D6 327 aaPredicted RBP4.15□□□□□ -1.75
CCDC7-213ENST00000639290 EXD3Q8N9H8 876 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 E2F7Q96AV8 911 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 PRIMPOLQ96LW4 560 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 LGMNQ99538 433 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 APOL6Q9BWW8 343 aa4.15□□□□□ -1.75
CCDC7-213ENST00000639290 OTOGQ6ZRI0 2925 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 PLA2G6O60733 806 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 AGFG2O95081 481 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ADH1AP07327 375 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ERVPABLB-1P60509 514 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 FAM189BP81408 668 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ICA1Q05084 483 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 USH1GQ495M9 461 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ARHGAP40Q5TG30 622 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 HIST2H2BCQ6DN03 193 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 DBX2Q6ZNG2 339 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 RALGPS2Q86X27 583 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-213ENST00000639290 MAP4K3Q8IVH8 894 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 SPATA5Q8NB90 893 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 CCDC26Q8TAB7 109 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 ZNF564Q8TBZ8 553 aaPredicted RBP4.14□□□□□ -1.75
CCDC7-213ENST00000639290 MIB2Q96AX9 1013 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 CENPTQ96BT3 561 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 TMEM169Q96HH4 297 aa4.14□□□□□ -1.75
CCDC7-213ENST00000639290 MAN1C1Q9NR34 630 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms