RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 GYG2O15488 501 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 ZNF157P51786 506 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 KIZQ2M2Z5 673 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 CA4P22748 312 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 SPACA7Q96KW9 195 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 PCDHB7Q9Y5E2 793 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 RNF123Q5XPI4 1314 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 SGO1Q5FBB7 561 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
CACNA1A-258ENST00000638029 EIF4A1P60842 406 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 CIAPIN1Q6FI81 312 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 COMMD2Q86X83 199 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 ATP6V0A4Q9HBG4 840 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 VPS39Q96JC1 886 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 CCDC17Q96LX7 622 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 CHL1O00533 1208 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 BMP3P12645 472 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 CYTH1Q15438 398 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 RC3H1Q5TC82 1133 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 HIBCHQ6NVY1 386 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 BTN2A1Q7KYR7 527 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 ASCC2Q9H1I8 757 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 TMEM206Q9H813 350 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 BBS2Q9BXC9 721 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 GREM2Q9H772 168 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 RAVER2Q9HCJ3 691 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 SH3BP1Q9Y3L3 701 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 KAT6AQ92794 2004 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 SERPINB2P05120 415 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 PDIA3P30101 505 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 IRAK1BP1Q5VVH5 260 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 NT5DC4Q86YG4 428 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 UXS1Q8NBZ7 420 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 MTBPQ96DY7 904 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 IKBKBO14920 756 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 IL31Q6EBC2 164 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 DEPDC7Q96QD5 511 aa17.31■□□□□ 0.36
CACNA1A-258ENST00000638029 TLR2O60603 784 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 NR5A1Q13285 461 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 ANKS6Q68DC2 871 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 SAYSD1Q9NPB0 183 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 DNMT1P26358 1616 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 ZNF699Q32M78 642 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 PRG3Q9Y2Y8 225 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 KIAA0556O60303 1618 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 TWF1Q12792 350 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 FASTKD1Q53R41 847 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 FOPNLQ96NB1 174 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 CMA1P23946 247 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 SRRM1Q8IYB3 904 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 CNPY4Q8N129 248 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 NFKBIZQ9BYH8 718 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 LEMD3Q9Y2U8 911 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 UBE4BO95155 1302 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 CLDN3O15551 220 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 PTH1RQ03431 593 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 AK8Q96MA6 479 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 TMEM245Q9H330 911 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 NOVA2Q9UNW9 492 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 PBLDP30039 288 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 ERAP2Q6P179 960 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 CYGBQ8WWM9 190 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 JADE3Q92613 823 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 TM6SF1Q9BZW5 370 aa17.3■□□□□ 0.36
CACNA1A-258ENST00000638029 DAB1O75553 588 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 OLFML2BQ68BL8 750 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 TBC1D1Q86TI0 1168 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 SPATA2LQ8IUW3 424 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 SNX31Q8N9S9 440 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 HSPBP1Q9NZL4 362 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 ACADMP11310 421 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 GPR1P46091 355 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 PCSK7Q16549 785 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 PLD3Q8IV08 490 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 MTIF3Q9H2K0 278 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 ATP1A1P05023 1023 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 RAD51Q06609 339 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 SCRN1Q12765 414 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 ZNF235Q14590 738 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 OR6J1Q8NGC5 347 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 A0A087WWV3 80 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 MAPK13O15264 365 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 RALAP11233 206 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 IGFBP4P22692 258 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 NLGN1Q8N2Q7 840 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 PARVGQ9HBI0 331 aa17.29■□□□□ 0.36
CACNA1A-258ENST00000638029 LRRC36Q1X8D7 754 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 SLC35F6Q8N357 371 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 ATP11CQ8NB49 1132 aa17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 DIS3LQ8TF46 1054 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-258ENST00000638029 PPP1R13BQ96KQ4 1090 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms