RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 KLHL29Q96CT2 875 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 RABGAP1Q9Y3P9 1069 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 PCDHA3Q9Y5H8 950 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 ATAD5Q96QE3 1844 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 ANKRD62A6NC57 917 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 RTN2O75298 545 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 GTF2IP78347 998 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 MAP2K1Q02750 393 aaPredicted RBP21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 SPDYCQ5MJ68 293 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 ARHGEF2Q92974 986 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 PWWP2AQ96N64 755 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 TBK1Q9UHD2 729 aa21.75■■□□□ 1.07
CACNA1A-243ENST00000637616 FAM13AO94988 1023 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 TRIP13Q15645 432 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 RINT1Q6NUQ1 792 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 ERICH1Q86X53 443 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 LENG9Q96B70 501 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 SERPINB13Q9UIV8 391 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 USP15Q9Y4E8 981 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 PFASO15067 1338 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 CHRNA3P32297 505 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 PDE6CP51160 858 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 ZNF570Q96NI8 536 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 EIF2AK1Q9BQI3 630 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 TRIM6Q9C030 488 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 NSRP1Q9H0G5 558 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 UBE2TQ9NPD8 197 aaPredicted RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 MSH4O15457 936 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 DLG4P78352 724 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 MPP2Q14168 576 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 KCNV2Q8TDN2 545 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 AGPAT1Q99943 283 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 APEX2Q9UBZ4 518 aa21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 DIS3Q9Y2L1 958 aaKnown RBP21.74■■□□□ 1.07
CACNA1A-243ENST00000637616 ARFGEF1Q9Y6D6 1849 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 UPP2O95045 317 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 SHMT1P34896 483 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 SCNN1DP51172 638 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 ZNF268Q14587 947 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 FITM2Q8N6M3 262 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 C1orf54Q8WWF1 131 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 ARHGEF1Q92888 912 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 L3MBTL3Q96JM7 780 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 CDC42EP4Q9H3Q1 356 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 CNOT7Q9UIV1 285 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 TISP43B9A030 160 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 RIMBP2O15034 1052 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 DRG2P55039 364 aaKnown RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 NAIF1Q69YI7 327 aaPredicted RBP21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 UBL4BQ8N7F7 174 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 KAT5Q92993 513 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 ELMO3Q96BJ8 720 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 RMDN2Q96LZ7 410 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 ZSWIM1Q9BR11 485 aa21.73■■□□□ 1.07
CACNA1A-243ENST00000637616 GTPBP10A4D1E9 387 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 CHKAP35790 457 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 BMT2Q1RMZ1 405 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 GPATCH4Q5T3I0 446 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 NSMFQ6X4W1 530 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 PCIF1Q9H4Z3 704 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 CFAP73A6NFT4 308 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 DLATP10515 647 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 RARGP13631 454 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 MYL7Q01449 175 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 PPP2R5EQ16537 467 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 TAOK1Q7L7X3 1001 aa21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 RPUSD2Q8IZ73 545 aaKnown RBP21.72■■□□□ 1.07
CACNA1A-243ENST00000637616 CYP3A7-CYP3A51PA0A087WV96 503 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 CYP3A7P24462 503 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 CTNNA2P26232 953 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 COILP38432 576 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 VPS41P49754 854 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 BZW1Q7L1Q6 419 aaKnown RBP21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 ARHGEF19Q8IW93 802 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 SYNGAP1Q96PV0 1343 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 COPS2P61201 443 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 IKQ13123 557 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 VSTM1Q6UX27 236 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 CRELD2Q6UXH1 353 aaPredicted RBP21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 CCDC134Q9H6E4 229 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 ARHGEF10LQ9HCE6 1279 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 PCYOX1Q9UHG3 505 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 CDK5RAP2Q96SN8 1893 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 C6orf229H3BNL8 230 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 PODXLO00592 558 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 ZNF76P36508 570 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 PEX5P50542 639 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 RIPK1Q13546 671 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 SEL1L2Q5TEA6 688 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 ZFPM1Q8IX07 1006 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 SPDL1Q96EA4 605 aa21.71■■□□□ 1.07
CACNA1A-243ENST00000637616 CACNB3P54284 484 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 KYNUQ16719 465 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 SLC17A8Q8NDX2 589 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 ART4Q93070 314 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 PCDHB18PQ96TA0 734 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 FAM167BQ9BTA0 163 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 HOMER3Q9NSC5 361 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 POLLQ9UGP5 575 aa21.7■■□□□ 1.06
CACNA1A-243ENST00000637616 FRMD4BQ9Y2L6 1034 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms