RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 TRIM6Q9C030 488 aaPredicted RBP21.05■□□□□ 0.96
CLN6-221ENST00000637494 GBP3Q9H0R5 595 aa21.05■□□□□ 0.96
CLN6-221ENST00000637494 POLR3FQ9H1D9 316 aaPredicted RBP21.05■□□□□ 0.96
CLN6-221ENST00000637494 TBC1D13Q9NVG8 400 aa21.05■□□□□ 0.96
CLN6-221ENST00000637494 ARHGEF35A5YM69 484 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 NT5C1B-RDH14C9J2C7 533 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 MED24O75448 989 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 OFD1O75665 1012 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 SPATA31C1P0DKV0 1188 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 ITGA4P13612 1032 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 U2AF2P26368 475 aaKnown RBP eCLIP21.04■□□□□ 0.96
CLN6-221ENST00000637494 ARL2P36404 184 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 MCM2P49736 904 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 COASYQ13057 564 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 CAPSQ13938 189 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 MRPL10Q7Z7H8 261 aaKnown RBP21.04■□□□□ 0.96
CLN6-221ENST00000637494 MSLNLQ96KJ4 702 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 NFKBIZQ9BYH8 718 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 STK39Q9UEW8 545 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 BARX2Q9UMQ3 279 aaPredicted RBP21.04■□□□□ 0.96
CLN6-221ENST00000637494 BRWD1Q9NSI6 2320 aa21.04■□□□□ 0.96
CLN6-221ENST00000637494 LRRIQ4A6NIV6 560 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 TSPAN1O60635 241 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 ALADP13716 330 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 NCLP19338 710 aaKnown RBP21.03■□□□□ 0.96
CLN6-221ENST00000637494 HOXA11P31270 313 aaPredicted RBP21.03■□□□□ 0.96
CLN6-221ENST00000637494 CCT6AP40227 531 aaKnown RBP21.03■□□□□ 0.96
CLN6-221ENST00000637494 ZP2Q05996 745 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 MCTP1Q6DN14 999 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 MAEAQ7L5Y9 396 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 ZBTB8OSQ8IWT0 167 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 ASAP3Q8TDY4 903 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 EPHX3Q9H6B9 360 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 CD320Q9NPF0 282 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 CLEC1BQ9P126 229 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 LRWD1Q9UFC0 647 aa21.03■□□□□ 0.96
CLN6-221ENST00000637494 A0A087WWV3 80 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 LAD1O00515 517 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 EYA4O95677 639 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 GLRA2P23416 452 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.96
CLN6-221ENST00000637494 GIT2Q14161 759 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 TMEM31Q5JXX7 168 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 UBXN11Q5T124 520 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 POTEGQ6S5H5 508 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 AGMOQ6ZNB7 445 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 SMRP1Q8NCR6 262 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 CPB2Q96IY4 423 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 CSRNP2Q9H175 543 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 NRDE2Q9H7Z3 1164 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 MYO7AQ13402 2215 aa21.02■□□□□ 0.96
CLN6-221ENST00000637494 MEIS3P2A8K0S8 358 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 PI4K2BG5E9Z4 385 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 H3BQV1 296 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 CXCL14O95715 111 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 GLP2RO95838 553 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 ALDH2P05091 517 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 COL9A1P20849 921 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 MBTD1Q05BQ5 628 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 PDIA5Q14554 519 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 TMEM132AQ24JP5 1023 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 VPS52Q8N1B4 723 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 MRPL43Q8N983 215 aaKnown RBP21.01■□□□□ 0.95
CLN6-221ENST00000637494 CASP10Q92851 521 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 IGSF21Q96ID5 467 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 TMX3Q96JJ7 454 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 C2orf40Q9H1Z8 148 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 PRMT7Q9NVM4 692 aaPredicted RBP21.01■□□□□ 0.95
CLN6-221ENST00000637494 IPPQ9Y573 584 aa21.01■□□□□ 0.95
CLN6-221ENST00000637494 HIDE1A8MVS5 230 aa21■□□□□ 0.95
CLN6-221ENST00000637494 NR1I2O75469 434 aa21■□□□□ 0.95
CLN6-221ENST00000637494 GALTP07902 379 aa21■□□□□ 0.95
CLN6-221ENST00000637494 PTGDRQ13258 359 aa21■□□□□ 0.95
CLN6-221ENST00000637494 PPP2R5AQ15172 486 aa21■□□□□ 0.95
CLN6-221ENST00000637494 LLGL2Q6P1M3 1020 aa21■□□□□ 0.95
CLN6-221ENST00000637494 PADI6Q6TGC4 694 aa21■□□□□ 0.95
CLN6-221ENST00000637494 DDX53Q86TM3 631 aaKnown RBP21■□□□□ 0.95
CLN6-221ENST00000637494 PRIMPOLQ96LW4 560 aa21■□□□□ 0.95
CLN6-221ENST00000637494 TMEM175Q9BSA9 504 aa21■□□□□ 0.95
CLN6-221ENST00000637494 FAN1Q9Y2M0 1017 aa21■□□□□ 0.95
CLN6-221ENST00000637494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.99■□□□□ 0.95
CLN6-221ENST00000637494 C19orf67A6NJJ6 358 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 ARF4P18085 180 aaPredicted RBP20.99■□□□□ 0.95
CLN6-221ENST00000637494 NBR1Q14596 966 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 RILPL1Q5EBL4 403 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 SLC27A1Q6PCB7 646 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 TMEM184AQ6ZMB5 413 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 SMG8Q8ND04 991 aaKnown RBP20.99■□□□□ 0.95
CLN6-221ENST00000637494 SNX29Q8TEQ0 813 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 IFT74Q96LB3 600 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 EIF2AQ9BY44 585 aaKnown RBP20.99■□□□□ 0.95
CLN6-221ENST00000637494 GPRC5CQ9NQ84 441 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 DNAJB4Q9UDY4 337 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 USP15Q9Y4E8 981 aaPredicted RBP20.99■□□□□ 0.95
CLN6-221ENST00000637494 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.99■□□□□ 0.95
CLN6-221ENST00000637494 PCDHB6Q9Y5E3 794 aa20.99■□□□□ 0.95
CLN6-221ENST00000637494 C2orf71A6NGG8 1288 aa20.98■□□□□ 0.95
CLN6-221ENST00000637494 POMCP01189 267 aa20.98■□□□□ 0.95
CLN6-221ENST00000637494 HOXB8P17481 243 aaPredicted RBP20.98■□□□□ 0.95
CLN6-221ENST00000637494 CYP11B2P19099 503 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms