RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 LIMD1Q9UGP4 676 aa19.99■□□□□ 0.79
CIITA-215ENST00000637439 SPDYE4A6NLX3 237 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 EML1O00423 815 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 TBX3O15119 743 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 ASAP2O43150 1006 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 SLC37A4O43826 429 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 CDKL5O76039 1030 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 ALDH2P05091 517 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 XBP1P17861 261 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 NPEPPSP55786 919 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 AGMOQ6ZNB7 445 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 OTUD6AQ7L8S5 288 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 NEK8Q86SG6 692 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 ZNF280BQ86YH2 543 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 CNNM3Q8NE01 707 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 UBN1Q9NPG3 1134 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 FAM86C1Q9NVL1 165 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 VAV3Q9UKW4 847 aa19.98■□□□□ 0.79
CIITA-215ENST00000637439 CACNA1HO95180 2353 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 GFRA3O60609 400 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 SRGAP2CP0DJJ0 459 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 KLRC2P26717 231 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 LAMTOR4Q0VGL1 99 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 STK3Q13188 491 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 TMC5Q6UXY8 1006 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 GPR149Q86SP6 731 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 C4orf19Q8IY42 314 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 AIFM3Q96NN9 605 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 PHF20Q9BVI0 1012 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 MRPL17Q9NRX2 175 aaKnown RBP19.97■□□□□ 0.79
CIITA-215ENST00000637439 SSX2IPQ9Y2D8 614 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 FAN1Q9Y2M0 1017 aa19.97■□□□□ 0.79
CIITA-215ENST00000637439 H0Y858 1186 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 MARCH6O60337 910 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 ASGR2P07307 311 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 CLCN4P51793 760 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 PCBP1Q15365 356 aaKnown RBP eCLIP19.96■□□□□ 0.79
CIITA-215ENST00000637439 EPHA7Q15375 998 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 KANK3Q6NY19 840 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 C15orf39Q6ZRI6 1047 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 CCDC149Q6ZUS6 474 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 OTOP3Q7RTS5 596 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 TMEM143Q96AN5 459 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 KLHL5Q96PQ7 755 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 VN1R3Q9BXE9 311 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 MFSD1Q9H3U5 465 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 DPP7Q9UHL4 492 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 KCNJ14Q9UNX9 436 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 DENND4AQ7Z401 1863 aa19.96■□□□□ 0.79
CIITA-215ENST00000637439 CCNT1O60563 726 aaKnown RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 DDHD2O94830 711 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 ERLIN2O94905 339 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 NCLP19338 710 aaKnown RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 HOXA11P31270 313 aaPredicted RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 YWHABP31946 246 aaKnown RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 CLCN5P51795 746 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 NCBP1Q09161 790 aaKnown RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 ASTLQ6HA08 431 aaPredicted RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 ELMSAN1Q6PJG2 1045 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 ZNF579Q8NAF0 562 aaKnown RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 LARP6Q9BRS8 491 aaKnown RBP19.95■□□□□ 0.78
CIITA-215ENST00000637439 LXNQ9BS40 222 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 MINDY3Q9H8M7 445 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 PDRG1Q9NUG6 133 aa19.95■□□□□ 0.78
CIITA-215ENST00000637439 PROB1E7EW31 1015 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 NRP1O14786 923 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 B4GALT3O60512 393 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 BAG4O95429 457 aaKnown RBP19.94■□□□□ 0.78
CIITA-215ENST00000637439 SOD2P04179 222 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 SSBP05455 408 aaKnown RBP eCLIP19.94■□□□□ 0.78
CIITA-215ENST00000637439 CNPP09543 421 aaKnown RBP19.94■□□□□ 0.78
CIITA-215ENST00000637439 AXLP30530 894 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 EMC2Q15006 297 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 UBXN11Q5T124 520 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 FERMT3Q86UX7 667 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 SLFN12Q8IYM2 578 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 TMEM105Q8N8V8 129 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 RNF149Q8NC42 400 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 CCDC51Q96ER9 411 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 ZSWIM4Q9H7M6 989 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 WRAP73Q9P2S5 460 aaPredicted RBP19.94■□□□□ 0.78
CIITA-215ENST00000637439 ZFHX2Q9C0A1 2572 aaPredicted RBP19.94■□□□□ 0.78
CIITA-215ENST00000637439 STK36Q9NRP7 1315 aa19.94■□□□□ 0.78
CIITA-215ENST00000637439 LILRB3O75022 631 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 POMCP01189 267 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 URODP06132 367 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 ITGA4P13612 1032 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 MXD4Q14582 209 aaPredicted RBP19.93■□□□□ 0.78
CIITA-215ENST00000637439 XKR9Q5GH70 373 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 CYP26C1Q6V0L0 522 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 HAS1Q92839 578 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 MTRQ99707 1265 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 SMOC2Q9H3U7 446 aa19.93■□□□□ 0.78
CIITA-215ENST00000637439 NR1I2O75469 434 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 ADH1AP07327 375 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 AFF1P51825 1210 aaKnown RBP19.92■□□□□ 0.78
CIITA-215ENST00000637439 TDGQ13569 410 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 TFDP1Q14186 410 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 NCAPH2Q6IBW4 605 aa19.92■□□□□ 0.78
CIITA-215ENST00000637439 NOTUMQ6P988 496 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms