RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	RPAIN	Q86UA6	219 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SLC9A9	Q8IVB4	645 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FAM114A1	Q8IWE2	563 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ZNF710	Q8N1W2	664 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	U2AF1L4	Q8WU68	220 aa	Known RBP	10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	NLRP7	Q8WX94	980 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	VTI1A	Q96AJ9	217 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	EEF2KMT	Q96G04	330 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ZNF668	Q96K58	619 aa	Predicted RBP	10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SEZ6L	Q9BYH1	1024 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MINDY3	Q9H8M7	445 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PRDM10	Q9NQV6	1147 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	DMAC2	Q9NW81	257 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	LIMA1	Q9UHB6	759 aa	Known RBP	10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	STYXL1	Q9Y6J8	313 aa		10.51	□□□□□ -0.73
CACNA1A-223	ENST00000636058	LRRC10B	A6NIK2	292 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TISP43	B9A030	160 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ANKRD63	C9JTQ0	380 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	INO80B-WBP1	J3KQ70	363 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ACKR2	O00590	384 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	HNRNPDL	O14979	420 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CETN3	O15182	167 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CLIC2	O15247	247 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SLC16A3	O15427	465 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GNA14	O95837	355 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PRKCB	P05771	671 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	IQCF3	P0C7M6	154 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CDK11B	P21127	795 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ADSS	P30520	456 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MNX1	P50219	401 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MARS	P56192	900 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FANCC	Q00597	558 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TMEM62	Q0P6H9	643 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PTGIS	Q16647	500 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	AMHR2	Q16671	573 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FAM187B	Q17R55	369 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	KIZ	Q2M2Z5	673 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ZPBP2	Q6X784	338 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SRGAP1	Q7Z6B7	1085 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FILIP1	Q7Z7B0	1213 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	WNT8B	Q93098	351 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CNOT6L	Q96LI5	555 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PPP1R16B	Q96T49	567 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CBWD1	Q9BRT8	395 aa		10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MRPL4	Q9BYD3	311 aa	Known RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	INO80B	Q9C086	356 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PRMT7	Q9NVM4	692 aa	Predicted RBP	10.5	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TTLL13P	A6NNM8	815 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ARVCF	O00192	962 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	AKAP3	O75969	853 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	DARS	P14868	501 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GART	P22102	1010 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GJA8	P48165	433 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	LIG4	P49917	911 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CDK7	P50613	346 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CRYBB1	P53674	252 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PLCB2	Q00722	1185 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PTK7	Q13308	1070 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	KRT31	Q15323	416 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ARMCX5	Q6P1M9	558 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TSHZ1	Q6ZSZ6	1077 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	RSPH3	Q86UC2	560 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	DHX38	Q92620	1227 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	BICD1	Q96G01	975 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PRIMPOL	Q96LW4	560 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SCLT1	Q96NL6	688 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	OSMR	Q99650	979 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MKNK1	Q9BUB5	465 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TARS2	Q9BW92	718 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CDHR5	Q9HBB8	845 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TRMT13	Q9NUP7	481 aa	Known RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	HSPBP1	Q9NZL4	362 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	USP20	Q9Y2K6	914 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CNTNAP2	Q9UHC6	1331 aa		10.49	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ABLIM1	O14639	778 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	B4GALT5	O43286	388 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	B4GALT4	O60513	344 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TSPAN1	O60635	241 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CAND2	O75155	1236 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TOM1L1	O75674	476 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ADCY5	O95622	1261 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SERPINC1	P01008	464 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TFRC	P02786	760 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	COL6A1	P12109	1028 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PROZ	P22891	400 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	EIF4B	P23588	611 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PSMC2	P35998	433 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CASP4	P49662	377 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	CYP2J2	P51589	502 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	ZNF75D	P51815	510 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MRPS6	P82932	125 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	MGAT3	Q09327	533 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	PRPF4B	Q13523	1007 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SNX17	Q15036	470 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	TRIM71	Q2Q1W2	868 aa	Known RBP	10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	SLFN12L	Q6IEE8	588 aa		10.48	□□□□□ -0.73
CACNA1A-223	ENST00000636058	FRMD5	Q7Z6J6	570 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms