RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 NCLNQ969V3 563 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 POLD4Q9HCU8 107 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 RBM12Q9NTZ6 932 aaKnown RBP10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 BTBD7Q9P203 1132 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 HSD17B3P37058 310 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 ADCY1Q08828 1119 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 LRRC14Q15048 493 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 IFNL3Q8IZI9 196 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 ORAI2Q96SN7 254 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 PCIF1Q9H4Z3 704 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 TRIM10Q9UDY6 481 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 COMMD3-BMI1R4GMX3 469 aa10.46□□□□□ -0.74
SPTAN1-228ENST00000635853 RAD17O75943 681 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 HSPD1P10809 573 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 CARSP49589 748 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TTMPQ5BVD1 217 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 ZC3H12BQ5HYM0 836 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 DNAJC24Q6P3W2 148 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 METTL16Q86W50 562 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 MAB21L3Q8N8X9 362 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 NRBF2Q96F24 287 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 EHD4Q9H223 541 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 EHD2Q9NZN4 543 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 MAP3K19Q56UN5 1328 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TTC26A0AVF1 554 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 BTBD18B2RXH4 712 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 SCG2P13521 617 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 GAP43P17677 238 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PAMP19021 973 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 CDC25CP30307 473 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TSPY1Q01534 308 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TBL3Q12788 808 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 EXOC3L4Q17RC7 722 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PDXDC1Q6P996 788 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 FAM196AQ6ZSG2 479 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 OR2W6PQ8NHA6 318 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 SERPINI1Q99574 410 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 LBHD1Q9BQE6 289 aaPredicted RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PRPF4O43172 522 aaKnown RBP eCLIP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TOM1L1O75674 476 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 SRGAP2CP0DJJ0 459 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 MYBL1P10243 752 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 CD58P19256 250 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TTC23LQ6PF05 361 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 ZWILCHQ9H900 591 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 STK17AQ9UEE5 414 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TRAPPC3O43617 180 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TTLL1O95922 423 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 BASP1P80723 227 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 OR6B3Q8NGW1 331 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 POLR3CQ9BUI4 534 aaPredicted RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 EDEM3Q9BZQ6 932 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TBK1Q9UHD2 729 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 SOS2Q07890 1332 aaPredicted RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 HOXB7P09629 217 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PRLRP16471 622 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 PGM1P36871 562 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 SERPINB8P50452 374 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 STAT2P52630 851 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 KCNA1Q09470 495 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 CAPRIN1Q14444 709 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 ATG16L1Q676U5 607 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 KCNV1Q6PIU1 500 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 DTX3LQ8TDB6 740 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 DDI1Q8WTU0 396 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 RBM41Q96IZ5 413 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 FAM81BQ96LP2 452 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 TRIM15Q9C019 465 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 GID8Q9NWU2 228 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 CDV3Q9UKY7 258 aaKnown RBP10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 DOLKQ9UPQ8 538 aa10.45□□□□□ -0.74
SPTAN1-228ENST00000635853 NEK2P51955 445 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 FMR1Q06787 632 aaKnown RBP eCLIP10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 KIF19Q2TAC6 998 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 PPP1R2P3Q6NXS1 205 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 CATSPER4Q7RTX7 472 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 CROCCP3Q8IVE0 287 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 SCN4BQ8IWT1 228 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 PPP2R3CQ969Q6 453 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 SMNDC1O75940 238 aaKnown RBP eCLIP10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 WFS1O76024 890 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 MMP1P03956 469 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 TAC1P20366 129 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 HOXA7P31268 230 aaPredicted RBP10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 RIPK1Q13546 671 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 BLMHQ13867 455 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 ADRM1Q16186 407 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 ERFEQ4G0M1 354 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 ASPRV1Q53RT3 343 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 CIAPIN1Q6FI81 312 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 SHC4Q6S5L8 630 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 TRMT10CQ7L0Y3 403 aaKnown RBP10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 MIGA2Q7L4E1 593 aa10.44□□□□□ -0.74
SPTAN1-228ENST00000635853 NLRP4Q96MN2 994 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms