RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 STAT3P40763 770 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 RESTQ13127 1097 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 MORF4L2Q15014 288 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 KNOP1Q1ED39 458 aaKnown RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 EFHC2Q5JST6 749 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 BTBD8Q5XKL5 378 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 PGBD3Q8N328 593 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 CEP72Q9P209 647 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.49□□□□□ -0.416e-6■■■■■ 38.2
SHPRH-211ENST00000629427 GPS1Q13098 491 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 FAM102AQ5T9C2 384 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 CYB5R4Q7L1T6 521 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 RAB42Q8N4Z0 105 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 DHX35Q9H5Z1 703 aaKnown RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 IP6K2Q9UHH9 426 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 DISP1Q96F81 1524 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 HECW2Q9P2P5 1572 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 TRIM49BA6NDI0 452 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 DCTN3O75935 186 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 PRCPP42785 496 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 PODNQ7Z5L7 613 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 SYT2Q8N9I0 419 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 SCOCQ9UIL1 159 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 ARHGEF5Q12774 1597 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 ZSCAN9O15535 394 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 CASP1P29466 404 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 LXNQ9BS40 222 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 ACAD9Q9H845 621 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 CDV3Q9UKY7 258 aaKnown RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 PLAAQ9Y263 795 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 TADA2AO75478 443 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 KCNJ6P48051 423 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 EFTUD2Q15029 972 aaKnown RBP eCLIP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 KDELC2Q7Z4H8 507 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 SPATA2LQ8IUW3 424 aaPredicted RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 DDX50Q9BQ39 737 aaKnown RBP12.49□□□□□ -0.41
SHPRH-211ENST00000629427 ING2Q9H160 280 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 GJB4Q9NTQ9 266 aa12.49□□□□□ -0.41
SHPRH-211ENST00000629427 MROH7-TTC4A0A0A0MT08 1334 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 GYG2O15488 501 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 DIAPH2O60879 1101 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 UPP2O95045 317 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 P4HBP07237 508 aaKnown RBP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ROR1Q01973 937 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 CCNYL1Q8N7R7 359 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ZNF564Q8TBZ8 553 aaPredicted RBP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 CHD1O14646 1710 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 RAD51Q06609 339 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 C11orf70Q9BRQ4 267 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 LCMT1Q9UIC8 334 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 F5H6K3 240 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 KRT38O76015 456 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ASMTLO95671 621 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ALDH1A1P00352 501 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 KLRC3Q07444 240 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 DUOXA2Q1HG44 320 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ELAC2Q9BQ52 826 aaKnown RBP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 EIF2AK1Q9BQI3 630 aaKnown RBP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 TTC37Q6PGP7 1564 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 E9PMD0 336 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 DCUN1D1Q96GG9 259 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 PARD6BQ9BYG5 372 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 MYO1DO94832 1006 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 SERPIND1P05546 499 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 KRT7P08729 469 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 MCF2P10911 925 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ZNF235Q14590 738 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ANKRD40Q6AI12 368 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 SLC9A2Q9UBY0 812 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 LARGE1O95461 756 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 TAGAPQ8N103 731 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 SEPT8Q92599 483 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 DOLKQ9UPQ8 538 aa12.48□□□□□ -0.41
SHPRH-211ENST00000629427 PIN4Q9Y237 131 aaKnown RBP12.48□□□□□ -0.41
SHPRH-211ENST00000629427 TNPO2O14787 897 aaKnown RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 FLOT2Q14254 428 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 ZNF746Q6NUN9 644 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 PPM1NQ8N819 430 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 MXD3Q9BW11 206 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 ADA2Q9NZK5 511 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 SNX24Q9Y343 169 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 PTCH1Q13635 1447 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 KBTBD13C9JR72 458 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 FTLP02792 175 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 HLA-DPA1P20036 260 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 TRIML2Q8N7C3 387 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 ABHD8Q96I13 439 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 TRIM62Q9BVG3 475 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 KIFC3Q9BVG8 833 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 TADA3O75528 432 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 CYBBP04839 570 aa12.47□□□□□ -0.41
SHPRH-211ENST00000629427 MDM2Q00987 491 aaPredicted RBP12.47□□□□□ -0.41
SHPRH-211ENST00000629427 DDIASQ8IXT1 998 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms