RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SMARCC2Q8TAQ2 1214 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 MUTYHQ9UIF7 546 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 HCN2Q9UL51 889 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 USP34Q70CQ2 3546 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 SPATA31C2B4DYI2 1134 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 RXRAP19793 462 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 UBE2HP62256 183 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 DLX2Q07687 328 aaPredicted RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 TOB2Q14106 344 aaPredicted RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 TIGD5Q53EQ6 642 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 CCDC178Q5BJE1 867 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 SERINC5Q86VE9 423 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 VSIG10LQ86VR7 867 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 CMTR1Q8N1G2 835 aaKnown RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 ANP32BQ92688 251 aaKnown RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 KRT23Q9C075 422 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 TSPY26PQ9H489 355 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 SENP2Q9HC62 589 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 LATS2Q9NRM7 1088 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 ZDHHC3Q9NYG2 299 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 LCTP09848 1927 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 MYH7BA7E2Y1 1941 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 GRM6O15303 877 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 PCP11498 1178 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 TRIM71Q2Q1W2 868 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 LEXMQ3ZCV2 418 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 KIAA0319Q5VV43 1072 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 FBXL19Q6PCT2 694 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 BTLAQ7Z6A9 289 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 SESTD1Q86VW0 696 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 PPP1R16BQ96T49 567 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 C16orf70Q9BSU1 422 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 ZNF215Q9UL58 517 aaPredicted RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 FAM50BQ9Y247 325 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 ATP6V1DQ9Y5K8 247 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 LRRC37A2A6NM11 1700 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 FAM221BA6H8Z2 402 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 PI4K2BG5E9Z4 385 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 GNAT1P11488 350 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 GPC1P35052 558 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 CA8P35219 290 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 NFX1Q12986 1120 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 PPFIA1Q13136 1202 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 ANKRD1Q15327 319 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 PLEKHG4Q58EX7 1191 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 NFXL1Q6ZNB6 911 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 HFE2Q6ZVN8 426 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 RPAINQ86UA6 219 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 LMBR1Q8WVP7 490 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 DNAJB3Q8WWF6 145 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 TOP1MTQ969P6 601 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 RPGRIP1Q96KN7 1286 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 FUCA2Q9BTY2 467 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 APOL5Q9BWW9 433 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 BRINP2Q9C0B6 783 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 SUV39H2Q9H5I1 410 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 NSUN3Q9H649 340 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 ZNF395Q9H8N7 513 aaPredicted RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 LMCD1Q9NZU5 365 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 SALL4Q9UJQ4 1053 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 SDK1Q7Z5N4 2213 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 KAT6AQ92794 2004 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 MYH6P13533 1939 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 PRR33A8MZF0 331 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 HAS3O00219 553 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 LINC01565O15544 149 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 STK10O94804 968 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 RPLP1P05386 114 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 NEDD9Q14511 834 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 SART3Q15020 963 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 TMEM266Q2M3C6 531 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 KCNV1Q6PIU1 500 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 BLOC1S2Q6QNY1 142 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 STOX1Q6ZVD7 989 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 CUL5Q93034 780 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 FBXL18Q96ME1 805 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 CNNM2Q9H8M5 875 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 MAD2L2Q9UI95 211 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 NOL7Q9UMY1 257 aaKnown RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 GPC6Q9Y625 555 aaPredicted RBP5.45□□□□□ -1.54
LINC00550-201ENST00000629293 MYO15AQ9UKN7 3530 aa5.45□□□□□ -1.54
LINC00550-201ENST00000629293 MICAL3Q7RTP6 2002 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 ACACBO00763 2458 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 MYH15Q9Y2K3 1946 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 CNOT1A5YKK6 2376 aaKnown RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 H3BNC9 293 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 TCF7P36402 384 aaPredicted RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 HSD17B4P51659 736 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 KRT32Q14532 448 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 WTAPQ15007 396 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 METTL7BQ6UX53 244 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 RUFY4Q6ZNE9 571 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 NECAB1Q8N987 351 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 PABPC5Q96DU9 382 aaKnown RBP5.44□□□□□ -1.54
LINC00550-201ENST00000629293 ABCB6Q9NP58 842 aa5.44□□□□□ -1.54
LINC00550-201ENST00000629293 SEC63Q9UGP8 760 aaKnown RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms