RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 SUCLA2Q9P2R7 463 aaPredicted RBP8.25□□□□□ -1.09
PTP4A1-206ENST00000627002 SRRDQ9UH36 339 aa8.25□□□□□ -1.09
PTP4A1-206ENST00000627002 NRCAMQ92823 1304 aa8.25□□□□□ -1.09
PTP4A1-206ENST00000627002 THSD7BQ9C0I4 1608 aa8.25□□□□□ -1.09
PTP4A1-206ENST00000627002 A0A1W2PQJ5 194 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 HNRNPDLO14979 420 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 SEPT4O43236 478 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 ZEB2O60315 1214 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 FKTNO75072 461 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 PIGRP01833 764 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 AFPP02771 609 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 MYL3P08590 195 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 KRT13P13646 458 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 KLRC1P26715 233 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 CNGA1P29973 690 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 LIG4P49917 911 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 PRMT2P55345 433 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 GJA9P57773 515 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 IGBP1P78318 339 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 NKX3-2P78367 333 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 CDC42EP1Q00587 391 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 ENPEPQ07075 957 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 CAPSQ13938 189 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 MFSD10Q14728 455 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 GRIK4Q16099 956 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 FSCN1Q16658 493 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 FIGNQ5HY92 759 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 SLFN12LQ6IEE8 588 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 MTHFD1LQ6UB35 978 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 INTS8Q75QN2 995 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 LRRC71Q8N4P6 559 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 METTL13Q8N6R0 699 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 LINC01465Q8N7H1 131 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 TRPV1Q8NER1 839 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 ZNF397Q8NF99 534 aaPredicted RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 CD99L2Q8TCZ2 262 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 CACTINQ8WUQ7 758 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 TRAPPC12Q8WVT3 735 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 POMGNT1Q8WZA1 660 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 PCMTD1Q96MG8 357 aaPredicted RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 PANX2Q96RD6 677 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 NFKBIZQ9BYH8 718 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 UPF3AQ9H1J1 476 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 KCNF1Q9H3M0 494 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 OCEL1Q9H607 264 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 KIAA1586Q9HCI6 787 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 HSPBP1Q9NZL4 362 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 ZNFX1Q9P2E3 1918 aaKnown RBP8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 ADGRA3Q8IWK6 1321 aa8.24□□□□□ -1.09
PTP4A1-206ENST00000627002 GTPBP10A4D1E9 387 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 HAS3O00219 553 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 STX10O60499 249 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 N4BP1O75113 896 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 MFAP3LO75121 409 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 LDHAP00338 332 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 HMGCRP04035 888 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 GYPCP04921 128 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 SRGAP2CP0DJJ0 459 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 SMIM10L2AP0DMW4 78 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 SMIM10L2BP0DMW5 78 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 RARBP10826 455 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 GNAT1P11488 350 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 SKILP12757 684 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 PHKA2P46019 1235 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CASP4P49662 377 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 PSEN2P49810 448 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CLCN3P51790 818 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CACNB2Q08289 660 aaPredicted RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 RBL2Q08999 1139 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 KCNH2Q12809 1159 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 SYCP1Q15431 976 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 PKN2Q16513 984 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 MAPK6Q16659 721 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 KIAA0753Q2KHM9 967 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 TSR1Q2NL82 804 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 DCAF17Q5H9S7 520 aaPredicted RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 TCERG1LQ5VWI1 586 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 ZPBP2Q6X784 338 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 TAS1R3Q7RTX0 852 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CTU1Q7Z7A3 348 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 USP37Q86T82 979 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 RHPN2Q8IUC4 686 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 TC2NQ8N9U0 490 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 RNF149Q8NC42 400 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 NEK11Q8NG66 645 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 RAET1EQ8TD07 263 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 PXYLP1Q8TE99 480 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 LENG1Q96BZ8 264 aaPredicted RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 BORCS6Q96GS4 357 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 ZNF830Q96NB3 372 aaPredicted RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 MAP7D2Q96T17 732 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CBWD1Q9BRT8 395 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 NAA15Q9BXJ9 866 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 MRPL4Q9BYD3 311 aaKnown RBP8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 EDEM3Q9BZQ6 932 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CCDC113Q9H0I3 377 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 IKZF4Q9H2S9 585 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 PCIF1Q9H4Z3 704 aa8.23□□□□□ -1.09
PTP4A1-206ENST00000627002 CAPN11Q9UMQ6 739 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms