RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 FAM193AP78312 1265 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ZC2HC1CQ53FD0 456 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 NUDT18Q6ZVK8 323 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TNIP3Q96KP6 325 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 NAA15Q9BXJ9 866 aaKnown RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 ARHGAP39Q9C0H5 1083 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 CBX8Q9HC52 389 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
HDAC9-229ENST00000622668 NGRNQ9NPE2 291 aaKnown RBP9.8□□□□□ -0.84
HDAC9-229ENST00000622668 MOCS2O96007 188 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 CD4P01730 458 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 THP07101 528 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 FDPSP14324 419 aaKnown RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 RECQLP46063 649 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 PTPROQ16827 1216 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 HSDL1Q3SXM5 330 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 SEL1L2Q5TEA6 688 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 OTOP1Q7RTM1 612 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 KSR1Q8IVT5 923 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 C16orf45Q96MC5 204 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 TYW1Q9NV66 732 aaKnown RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 IKBKGQ9Y6K9 419 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 SHPRHQ149N8 1683 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 PLCH1Q4KWH8 1693 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 A6NJR5 290 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 PPIGQ13427 754 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 HADHQ16836 314 aaKnown RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 UVSSAQ2YD98 709 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 RNPEPQ9H4A4 650 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 VAMP7P51809 220 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 LRRC63Q05C16 580 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 TRIM14Q14142 442 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 MAN2A1Q16706 1144 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 ANKS1AQ92625 1134 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 APOL5Q9BWW9 433 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA6CA6NDK9 693 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA6BA6NDN3 693 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA6DP0CG33 693 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 ATXN8OSP0DMR3 200 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 CDO1Q16878 200 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 PPP4R3CPQ6ZMV5 832 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 CCSER1Q9C0I3 900 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 NUCKS1Q9H1E3 243 aaKnown RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 ALDH8A1Q9H2A2 487 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-229ENST00000622668 GOLGA6AQ9NYA3 693 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 RASAL2Q9UJF2 1139 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 MAN1B1Q9UKM7 699 aa9.79□□□□□ -0.84
HDAC9-229ENST00000622668 TOPAZ1Q8N9V7 1692 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 SALL3Q9BXA9 1300 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 HOXC6P09630 235 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 AKAP5P24588 427 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 CD52P31358 61 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 NNMTP40261 264 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 LAMTOR4Q0VGL1 99 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 CCDC60Q8IWA6 550 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 DCP1BQ8IZD4 617 aaKnown RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 BBS5Q8N3I7 341 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 DPP7Q9UHL4 492 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 GFPT2O94808 682 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 CLTAP09496 248 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 EIF4BP23588 611 aaKnown RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 U2AF2P26368 475 aaKnown RBP eCLIP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 PCSK1P29120 753 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 ACLYP53396 1101 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 CES5AQ6NT32 575 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 USP49Q70CQ1 688 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 GSDMBQ8TAX9 411 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF384Q8TF68 577 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 TEPSINQ96N21 525 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 BAG1Q99933 345 aaPredicted RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 LMBRD1Q9NUN5 540 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 TXNDC16Q9P2K2 825 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 NEMP1O14524 444 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 KIF3CO14782 793 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 MED24O75448 989 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 CYP2C18P33260 490 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 NDUFV1P49821 464 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 DPCR1Q3MIW9 517 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 CST9Q5W186 159 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 MOXD1Q6UVY6 613 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 RBM23Q86U06 439 aaKnown RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 KIF18AQ8NI77 898 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 FAM81BQ96LP2 452 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 C12orf42Q96LP6 360 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 MFSD1Q9H3U5 465 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 KANSL3Q9P2N6 904 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 UBQLN1Q9UMX0 589 aaKnown RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 FNDC3AQ9Y2H6 1198 aaKnown RBP9.78□□□□□ -0.84
HDAC9-229ENST00000622668 FAM169AQ9Y6X4 670 aa9.78□□□□□ -0.84
HDAC9-229ENST00000622668 MYO1FO00160 1098 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 ATP9AO75110 1047 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 AMHR2Q16671 573 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 CTXN3Q4LDR2 81 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 BTBD8Q5XKL5 378 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 KRT39Q6A163 491 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 BTNL9Q6UXG8 535 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 ABRAQ8N0Z2 381 aa9.77□□□□□ -0.84
HDAC9-229ENST00000622668 ARNTL2Q8WYA1 636 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms