RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CCSAPQ6IQ19 270 aaPredicted RBP20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 ARMCX5Q6P1M9 558 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 CCDC186Q7Z3E2 898 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 TRIM59Q8IWR1 403 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 CCDC155Q8N6L0 562 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 GOLGA5Q8TBA6 731 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 ZBTB45Q96K62 511 aaPredicted RBP20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 ZNF830Q96NB3 372 aaPredicted RBP20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 KATNAL1Q9BW62 490 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 TARS2Q9BW92 718 aaKnown RBP20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 CCDC113Q9H0I3 377 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 HSPBP1Q9NZL4 362 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 PHLPP2Q6ZVD8 1323 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 A0A087WZ62 844 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 H0YCG3 227 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 STRN3Q13033 797 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 MAN2A1Q16706 1144 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 NBPF20Q3BBV1 942 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 VWA3BQ502W6 1294 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 FAM186BQ8IYM0 893 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 SAAL1Q96ER3 474 aa20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 FDXACB1Q9BRP7 624 aaPredicted RBP20.35■□□□□ 0.85
SEMA6C-210ENST00000621728 MBLAC1A4D2B0 266 aaPredicted RBP20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 EXOC3O60645 756 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 GNA14O95837 355 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 CYP2C9P11712 490 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 MARSP56192 900 aaKnown RBP20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 LHX8Q68G74 356 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 SLC9A9Q8IVB4 645 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 C7orf31Q8N865 590 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 BORCS6Q96GS4 357 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 HAPLN2Q9GZV7 340 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 TMEM134Q9H6X4 195 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 IFT122Q9HBG6 1241 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 HMX1Q9NP08 348 aaPredicted RBP20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 KCNG1Q9UIX4 513 aa20.34■□□□□ 0.85
SEMA6C-210ENST00000621728 C17orf102A2RUQ5 167 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 SLC16A3O15427 465 aaKnown RBP20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 KPNA6O60684 536 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 IQCF3P0C7M6 154 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 EPB41P11171 864 aaKnown RBP20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 TMOD1P28289 359 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 KLK7P49862 253 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 LIG4P49917 911 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 TFDP1Q14186 410 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 NOLC1Q14978 699 aaKnown RBP eCLIP20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 ZBTB8OSQ8IWT0 167 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 C12orf56Q8IXR9 622 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 NDST4Q9H3R1 872 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 ARMCX3Q9UH62 379 aaPredicted RBP20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 PTPN22Q9Y2R2 807 aa20.33■□□□□ 0.85
SEMA6C-210ENST00000621728 MSCO60682 206 aa20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 PRKCBP05771 671 aa20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 PSMC2P35998 433 aaKnown RBP20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 PTENP60484 403 aa20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 MBTD1Q05BQ5 628 aa20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 FRMD5Q7Z6J6 570 aa20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 KCNN1Q92952 543 aa20.33■□□□□ 0.84
SEMA6C-210ENST00000621728 INO80B-WBP1J3KQ70 363 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 ASAP2O43150 1006 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 B4GALT5O43286 388 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 ZEB2O60315 1214 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 CST5P28325 142 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 HOXC8P31273 242 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 GPC3P51654 580 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 EFNA5P52803 228 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 NLRP11P59045 1033 aaKnown RBP20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 KIZQ2M2Z5 673 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 DCAF17Q5H9S7 520 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 SPECC1LQ69YQ0 1117 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 XXYLT1Q8NBI6 393 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 DNAJB3Q8WWF6 145 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 NLRP7Q8WX94 980 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 POMGNT1Q8WZA1 660 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 MAP7D2Q96T17 732 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 INO80BQ9C086 356 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 UNC93B1Q9H1C4 597 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 CDHR5Q9HBB8 845 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 GRIN2DO15399 1336 aa20.32■□□□□ 0.84
SEMA6C-210ENST00000621728 ADRB2P07550 413 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 FAM47CQ5HY64 1035 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 GDF6Q6KF10 455 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 CBWD2Q8IUF1 395 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 CGNQ9P2M7 1197 aaKnown RBP20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 ANKFY1Q9P2R3 1169 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 GINS2Q9Y248 185 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 FRMD4BQ9Y2L6 1034 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 PIGRP01833 764 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 TBX2Q13207 712 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 TCERG1LQ5VWI1 586 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 CDR2LQ86X02 465 aaPredicted RBP20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 KIAA1524Q8TCG1 905 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 C2orf40Q9H1Z8 148 aa20.31■□□□□ 0.84
SEMA6C-210ENST00000621728 SMIM35A0A1B0GVV1 85 aa20.3■□□□□ 0.84
SEMA6C-210ENST00000621728 TULP1O00294 542 aaPredicted RBP20.3■□□□□ 0.84
SEMA6C-210ENST00000621728 TRIM49P0CI25 452 aa20.3■□□□□ 0.84
SEMA6C-210ENST00000621728 TRIM49CP0CI26 452 aa20.3■□□□□ 0.84
SEMA6C-210ENST00000621728 HARSP12081 509 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms