RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 MAN2A1Q16706 1144 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 CBWD2Q8IUF1 395 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 GOLGA6L6A8MZA4 724 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 EPB41P11171 864 aaKnown RBP17.4■□□□□ 0.38
CBWD3-216ENST00000621396 GRK4P32298 578 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 MAP2K1Q02750 393 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-216ENST00000621396 KCNH2Q12809 1159 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 MAP3K21Q5TCX8 1036 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 FOXR2Q6PJQ5 311 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 LINC01465Q8N7H1 131 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 PCMTD1Q96MG8 357 aaPredicted RBP17.4■□□□□ 0.38
CBWD3-216ENST00000621396 SCLT1Q96NL6 688 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 CDHR5Q9HBB8 845 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 SAGE1Q9NXZ1 904 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.4■□□□□ 0.38
CBWD3-216ENST00000621396 FRMD4BQ9Y2L6 1034 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 KAT6AQ92794 2004 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 NRCAMQ92823 1304 aa17.39■□□□□ 0.38
CBWD3-216ENST00000621396 HAS3O00219 553 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 PSMC2P35998 433 aaKnown RBP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 MATR3P43243 847 aaKnown RBP eCLIP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 FAM47CQ5HY64 1035 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 ZBTB41Q5SVQ8 909 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 C7orf31Q8N865 590 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 SLC17A8Q8NDX2 589 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 DNAJB3Q8WWF6 145 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 NLRP7Q8WX94 980 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 BORCS6Q96GS4 357 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 SPC25Q9HBM1 224 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 FAM207AQ9NSI2 230 aaPredicted RBP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 EXOC7Q9UPT5 735 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 EPHB6O15197 1021 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 MAGEB2O15479 319 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 MSCO60682 206 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 GYPCP04921 128 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 TPM2P07951 284 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 TMOD1P28289 359 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 CASP14P31944 242 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 ACOT2P49753 483 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 NBPF20Q3BBV1 942 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 ZBTB33Q86T24 672 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 LRRC8AQ8IWT6 810 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 C17orf53Q8N3J3 647 aaPredicted RBP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 POP1Q99575 1024 aaKnown RBP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 JPH2Q9BR39 696 aaPredicted RBP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 FAM213AQ9BRX8 229 aa17.39■□□□□ 0.37
CBWD3-216ENST00000621396 DDX20Q9UHI6 824 aaKnown RBP17.39■□□□□ 0.37
CBWD3-216ENST00000621396 GAS2O43903 313 aaKnown RBP17.38■□□□□ 0.37
CBWD3-216ENST00000621396 GNA14O95837 355 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 ADRB2P07550 413 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 XXYLT1Q8NBI6 393 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 PXYLP1Q8TE99 480 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 SLC35C1Q96A29 364 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 CCDC127Q96BQ5 260 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 PPME1Q9Y570 386 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 TRIP12Q14669 1992 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-216ENST00000621396 CASP8AP2Q9UKL3 1982 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 CYP2C9P11712 490 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 MARSP56192 900 aaKnown RBP17.38■□□□□ 0.37
CBWD3-216ENST00000621396 TBX2Q13207 712 aaPredicted RBP17.38■□□□□ 0.37
CBWD3-216ENST00000621396 FRMD5Q7Z6J6 570 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 GOLGA5Q8TBA6 731 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 PLEKHO2Q8TD55 490 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 VTI1AQ96AJ9 217 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 TCHPQ9BT92 498 aa17.38■□□□□ 0.37
CBWD3-216ENST00000621396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.38■□□□□ 0.37
CBWD3-216ENST00000621396 LRRN2O75325 713 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 PRKCBP05771 671 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 SNRNP35Q16560 246 aaKnown RBP17.37■□□□□ 0.37
CBWD3-216ENST00000621396 MAPK6Q16659 721 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 CDCA2Q69YH5 1023 aaPredicted RBP17.37■□□□□ 0.37
CBWD3-216ENST00000621396 EXOC8Q8IYI6 725 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 CCDC113Q9H0I3 377 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 AGPAT5Q9NUQ2 364 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 WBP1LQ9NX94 342 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 PTENP60484 403 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 KCNMA1Q12791 1236 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 FKBP15Q5T1M5 1219 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 ZBTB8OSQ8IWT0 167 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 CPB2Q96IY4 423 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 MAP7D2Q96T17 732 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
CBWD3-216ENST00000621396 PYCARDQ9ULZ3 195 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 COL1A2P08123 1366 aa17.37■□□□□ 0.37
CBWD3-216ENST00000621396 GNRH1P01148 92 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 GPC3P51654 580 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 WNT7BP56706 349 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 ADAM17P78536 824 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 MTFR1Q15390 333 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 CBWD6Q4V339 395 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 CBWD3Q5JTY5 395 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 CBWD5Q5RIA9 395 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 SLC9A9Q8IVB4 645 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 TC2NQ8N9U0 490 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 ELMO3Q96BJ8 720 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 HVCN1Q96D96 273 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 OSMRQ99650 979 aa17.36■□□□□ 0.37
CBWD3-216ENST00000621396 HMX1Q9NP08 348 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms