RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 U2AF1L4Q8WU68 220 aaKnown RBP23.11■■□□□ 1.29
LIME1-210ENST00000621325 SPIRE2Q8WWL2 714 aa23.11■■□□□ 1.29
LIME1-210ENST00000621325 FUT8Q9BYC5 575 aa23.11■■□□□ 1.29
LIME1-210ENST00000621325 SUGCTQ9HAC7 445 aa23.11■■□□□ 1.29
LIME1-210ENST00000621325 GEMIN8Q9NWZ8 242 aaKnown RBP23.11■■□□□ 1.29
LIME1-210ENST00000621325 SYNGAP1Q96PV0 1343 aa23.11■■□□□ 1.29
LIME1-210ENST00000621325 IGSF9BQ9UPX0 1349 aa23.11■■□□□ 1.29
LIME1-210ENST00000621325 LOC102724159A0A0B4J2E5 919 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 DKC1O60832 514 aaKnown RBP eCLIP23.1■■□□□ 1.29
LIME1-210ENST00000621325 TCP1P17987 556 aaKnown RBP23.1■■□□□ 1.29
LIME1-210ENST00000621325 ICAM3P32942 547 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 PWP2Q15269 919 aaKnown RBP23.1■■□□□ 1.29
LIME1-210ENST00000621325 SNRNP35Q16560 246 aaKnown RBP23.1■■□□□ 1.29
LIME1-210ENST00000621325 GLYCTKQ8IVS8 523 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 SLC17A8Q8NDX2 589 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 ASCC2Q9H1I8 757 aaPredicted RBP23.1■■□□□ 1.29
LIME1-210ENST00000621325 GOLPH3Q9H4A6 298 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 YY1AP1Q9H869 796 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 EXOC7Q9UPT5 735 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 FOXN3O00409 490 aaPredicted RBP23.1■■□□□ 1.29
LIME1-210ENST00000621325 EPC2Q52LR7 807 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 BEND6Q5SZJ8 279 aaPredicted RBP23.1■■□□□ 1.29
LIME1-210ENST00000621325 C10orf76Q5T2E6 689 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 CCDC127Q96BQ5 260 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 CDCA5Q96FF9 252 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 SYT17Q9BSW7 474 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 TMEM117Q9H0C3 514 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 ARID2Q68CP9 1835 aa23.1■■□□□ 1.29
LIME1-210ENST00000621325 PPATQ06203 517 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 XKR3Q5GH77 459 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 EEPD1Q7L9B9 569 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 MS4A14Q96JA4 679 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 RPGRIP1Q96KN7 1286 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 POP1Q99575 1024 aaKnown RBP23.09■■□□□ 1.29
LIME1-210ENST00000621325 POLR3FQ9H1D9 316 aaPredicted RBP23.09■■□□□ 1.29
LIME1-210ENST00000621325 ATP6V0A4Q9HBG4 840 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 UBE2TQ9NPD8 197 aaPredicted RBP23.09■■□□□ 1.29
LIME1-210ENST00000621325 USP20Q9Y2K6 914 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 CNMDO75829 334 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 UBA1P22314 1058 aaKnown RBP23.09■■□□□ 1.29
LIME1-210ENST00000621325 SNRPFP62306 86 aaKnown RBP23.09■■□□□ 1.29
LIME1-210ENST00000621325 TTLL12Q14166 644 aaPredicted RBP23.09■■□□□ 1.29
LIME1-210ENST00000621325 TAS1R3Q7RTX0 852 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 VPS36Q86VN1 386 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 MCPH1Q8NEM0 835 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 SLC30A5Q8TAD4 765 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 SYT11Q9BT88 431 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 MAF1Q9H063 256 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 TXNRD2Q9NNW7 524 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 ZNF302Q9NR11 478 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 FBXO40Q9UH90 709 aa23.09■■□□□ 1.29
LIME1-210ENST00000621325 ERO1BQ86YB8 467 aa23.08■■□□□ 1.29
LIME1-210ENST00000621325 PROCA1Q8NCQ7 364 aaPredicted RBP23.08■■□□□ 1.29
LIME1-210ENST00000621325 HNRNPLLQ8WVV9 542 aaKnown RBP23.08■■□□□ 1.29
LIME1-210ENST00000621325 KAT5Q92993 513 aa23.08■■□□□ 1.29
LIME1-210ENST00000621325 C17orf75Q9HAS0 396 aa23.08■■□□□ 1.29
LIME1-210ENST00000621325 MAFBQ9Y5Q3 323 aaPredicted RBP23.08■■□□□ 1.29
LIME1-210ENST00000621325 A0A0G2JMZ2 1700 aa23.08■■□□□ 1.29
LIME1-210ENST00000621325 MAPK13O15264 365 aa23.08■■□□□ 1.28
LIME1-210ENST00000621325 ZMYND10O75800 440 aa23.08■■□□□ 1.28
LIME1-210ENST00000621325 ATG7O95352 703 aa23.08■■□□□ 1.28
LIME1-210ENST00000621325 ANXA13P27216 316 aa23.08■■□□□ 1.28
LIME1-210ENST00000621325 HNRNPH2P55795 449 aaKnown RBP23.08■■□□□ 1.28
LIME1-210ENST00000621325 TMEM143Q96AN5 459 aa23.08■■□□□ 1.28
LIME1-210ENST00000621325 HVCN1Q96D96 273 aa23.08■■□□□ 1.28
LIME1-210ENST00000621325 TOPORSQ9NS56 1045 aaPredicted RBP23.08■■□□□ 1.28
LIME1-210ENST00000621325 MYH9P35579 1960 aaKnown RBP23.07■■□□□ 1.28
LIME1-210ENST00000621325 BTNL10A8MVZ5 291 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 TMCO5BA8MYB1 307 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 MXI1P50539 228 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 MAP2K1Q02750 393 aaPredicted RBP23.07■■□□□ 1.28
LIME1-210ENST00000621325 EMC2Q15006 297 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 PTPROQ16827 1216 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 MEI1Q5TIA1 1274 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 PALB2Q86YC2 1186 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 ANKRD13AQ8IZ07 590 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 SPATA4Q8NEY3 305 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 HINFPQ9BQA5 517 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 PGK2P07205 417 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 H2AFZP0C0S5 128 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 EDNRBP24530 442 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 MATR3P43243 847 aaKnown RBP eCLIP23.07■■□□□ 1.28
LIME1-210ENST00000621325 NOP2P46087 812 aaKnown RBP23.07■■□□□ 1.28
LIME1-210ENST00000621325 MRPS25P82663 173 aaKnown RBP23.07■■□□□ 1.28
LIME1-210ENST00000621325 H2AFVQ71UI9 128 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 POMGNT1Q8WZA1 660 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 FAM84AQ96KN4 292 aa23.07■■□□□ 1.28
LIME1-210ENST00000621325 SPDYE5A6NIY4 337 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 HNRNPDLO14979 420 aaKnown RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 ATP8B1O43520 1251 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 N4BP1O75113 896 aaKnown RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 OATP04181 439 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 POLGP54098 1239 aaPredicted RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 WDR93Q6P2C0 686 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 ZNF572Q7Z3I7 529 aaPredicted RBP23.06■■□□□ 1.28
LIME1-210ENST00000621325 PARD3BQ8TEW8 1205 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 SEMA4DQ92854 862 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 ELMO3Q96BJ8 720 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 PCYT2Q99447 389 aa23.06■■□□□ 1.28
LIME1-210ENST00000621325 GSTTP1A0A1W2PQM5 241 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms