RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TMEM173Q86WV6 379 aaPredicted RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 IFNLR1Q8IU57 520 aaPredicted RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 PGBD4Q96DM1 585 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 CPB2Q96IY4 423 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 TMX3Q96JJ7 454 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 NOL7Q9UMY1 257 aaKnown RBP19.08■□□□□ 0.64
HMGN3-203ENST00000620514 FAM50BQ9Y247 325 aa19.08■□□□□ 0.64
HMGN3-203ENST00000620514 ALDH7A1P49419 539 aaKnown RBP19.07■□□□□ 0.64
HMGN3-203ENST00000620514 AMHR2Q16671 573 aa19.07■□□□□ 0.64
HMGN3-203ENST00000620514 TMC7Q7Z402 723 aa19.07■□□□□ 0.64
HMGN3-203ENST00000620514 SMG8Q8ND04 991 aaKnown RBP19.07■□□□□ 0.64
HMGN3-203ENST00000620514 NACC1Q96RE7 527 aa19.07■□□□□ 0.64
HMGN3-203ENST00000620514 EIF2AQ9BY44 585 aaKnown RBP19.07■□□□□ 0.64
HMGN3-203ENST00000620514 GBP3Q9H0R5 595 aa19.07■□□□□ 0.64
HMGN3-203ENST00000620514 DNAJB4Q9UDY4 337 aa19.07■□□□□ 0.64
HMGN3-203ENST00000620514 DBR1Q9UK59 544 aaKnown RBP19.07■□□□□ 0.64
HMGN3-203ENST00000620514 PCDHB6Q9Y5E3 794 aa19.07■□□□□ 0.64
HMGN3-203ENST00000620514 EYA4O95677 639 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 RPA1P27694 616 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 RNASELQ05823 741 aaKnown RBP19.06■□□□□ 0.64
HMGN3-203ENST00000620514 POU5F1BQ06416 359 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 ECM1Q16610 540 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 ZNF280BQ86YH2 543 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 ADHFE1Q8IWW8 467 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 ERMNQ8TAM6 284 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 BCL7CQ8WUZ0 217 aaPredicted RBP19.06■□□□□ 0.64
HMGN3-203ENST00000620514 CDCA3Q99618 268 aaPredicted RBP19.06■□□□□ 0.64
HMGN3-203ENST00000620514 RNF39Q9H2S5 420 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 RSAD1Q9HA92 442 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 NGRNQ9NPE2 291 aaKnown RBP19.06■□□□□ 0.64
HMGN3-203ENST00000620514 PRKAG3Q9UGI9 489 aa19.06■□□□□ 0.64
HMGN3-203ENST00000620514 B4GALT5O43286 388 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 GALTP07902 379 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 NCLP19338 710 aaKnown RBP19.05■□□□□ 0.64
HMGN3-203ENST00000620514 SLC11A1P49279 550 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 FXR2P51116 673 aaKnown RBP eCLIP19.05■□□□□ 0.64
HMGN3-203ENST00000620514 COASYQ13057 564 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 SMRP1Q8NCR6 262 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 RSPH1Q8WYR4 309 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 TMEM169Q96HH4 297 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 UPF2Q9HAU5 1272 aaKnown RBP19.05■□□□□ 0.64
HMGN3-203ENST00000620514 HES2Q9Y543 173 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 IPPQ9Y573 584 aa19.05■□□□□ 0.64
HMGN3-203ENST00000620514 LRRIQ4A6NIV6 560 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 C19orf67A6NJJ6 358 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 PI4K2BG5E9Z4 385 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 DDHD2O94830 711 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 ITGA4P13612 1032 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 ARF4P18085 180 aaPredicted RBP19.04■□□□□ 0.64
HMGN3-203ENST00000620514 AXLP30530 894 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 CCT6AP40227 531 aaKnown RBP19.04■□□□□ 0.64
HMGN3-203ENST00000620514 PTGDRQ13258 359 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 KCNC3Q14003 757 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 PCBP1Q15365 356 aaKnown RBP eCLIP19.04■□□□□ 0.64
HMGN3-203ENST00000620514 LLGL2Q6P1M3 1020 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 NOTUMQ6P988 496 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 PADI6Q6TGC4 694 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 CDR2LQ86X02 465 aaPredicted RBP19.04■□□□□ 0.64
HMGN3-203ENST00000620514 URGCPQ8TCY9 931 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 BSNDQ8WZ55 320 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 IGSF21Q96ID5 467 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 C1QTNF1Q9BXJ1 281 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 NFKBIZQ9BYH8 718 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 CSRNP2Q9H175 543 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 RAPGEFL1Q9UHV5 662 aa19.04■□□□□ 0.64
HMGN3-203ENST00000620514 CNTNAP2Q9UHC6 1331 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 ARHGEF35A5YM69 484 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 C2orf71A6NGG8 1288 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 POMCP01189 267 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 COL9A1P20849 921 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 GJB2P29033 226 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 CA8P35219 290 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 SMC1AQ14683 1233 aaKnown RBP19.03■□□□□ 0.64
HMGN3-203ENST00000620514 MCTP1Q6DN14 999 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 VPS52Q8N1B4 723 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 MRPL43Q8N983 215 aaKnown RBP19.03■□□□□ 0.64
HMGN3-203ENST00000620514 MCPH1Q8NEM0 835 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 AUTS2Q8WXX7 1259 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 CCDC51Q96ER9 411 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 TBC1D32Q96NH3 1257 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 APOL6Q9BWW8 343 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 VN1R3Q9BXE9 311 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 POLD4Q9HCU8 107 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 C11orf16Q9NQ32 467 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 LRWD1Q9UFC0 647 aa19.03■□□□□ 0.64
HMGN3-203ENST00000620514 USP15Q9Y4E8 981 aaPredicted RBP19.03■□□□□ 0.64
HMGN3-203ENST00000620514 FAM86C2PA6NEL3 165 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 PP2D1A8MPX8 630 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 CXCL14O95715 111 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 CYP11B2P19099 503 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 NCBP1Q09161 790 aaKnown RBP19.02■□□□□ 0.64
HMGN3-203ENST00000620514 IL17AQ16552 155 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 HAUS3Q68CZ6 603 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 DDX53Q86TM3 631 aaKnown RBP19.02■□□□□ 0.64
HMGN3-203ENST00000620514 CNNM3Q8NE01 707 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 GAD1Q99259 594 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 APOL5Q9BWW9 433 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 ZBP1Q9H171 429 aa19.02■□□□□ 0.64
HMGN3-203ENST00000620514 NXF3Q9H4D5 531 aaKnown RBP19.02■□□□□ 0.64
HMGN3-203ENST00000620514 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms