RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TPRP12270 2363 aaKnown RBP9.59□□□□□ -0.87
GPC6-202ENST00000617456 CACNA1BQ00975 2339 aa9.59□□□□□ -0.87
GPC6-202ENST00000617456 ZNF292O60281 2723 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 CYP3A7-CYP3A51PA0A087WV96 503 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 A0A0U1RQF3 1178 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 NARSO43776 548 aaKnown RBP9.58□□□□□ -0.88
GPC6-202ENST00000617456 CDKL5O76039 1030 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 SSBP05455 408 aaKnown RBP eCLIP9.58□□□□□ -0.88
GPC6-202ENST00000617456 PSAPP07602 524 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 CTSAP10619 480 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 DARSP14868 501 aaKnown RBP9.58□□□□□ -0.88
GPC6-202ENST00000617456 CYP3A7P24462 503 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 KLRC2P26717 231 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 SFNP31947 248 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 TDGQ13569 410 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 ANKRD1Q15327 319 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 CCDC149Q6ZUS6 474 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 OTOP3Q7RTS5 596 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
GPC6-202ENST00000617456 DAGLBQ8NCG7 672 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 BCL7CQ8WUZ0 217 aaPredicted RBP9.58□□□□□ -0.88
GPC6-202ENST00000617456 RIN2Q8WYP3 895 aaPredicted RBP9.58□□□□□ -0.88
GPC6-202ENST00000617456 LPPQ93052 612 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 FAM167AQ96KS9 214 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 RTP3Q9BQQ7 232 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 GBP3Q9H0R5 595 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 SAMM50Q9Y512 469 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 CEP250Q9BV73 2442 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 SPTBN2O15020 2390 aa9.58□□□□□ -0.88
GPC6-202ENST00000617456 MED19A0JLT2 244 aaPredicted RBP9.57□□□□□ -0.88
GPC6-202ENST00000617456 CPLX1O14810 134 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 CFHP08603 1231 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 XBP1P17861 261 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 GPC3P51654 580 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 RNASELQ05823 741 aaKnown RBP9.57□□□□□ -0.88
GPC6-202ENST00000617456 SSRP1Q08945 709 aaKnown RBP9.57□□□□□ -0.88
GPC6-202ENST00000617456 TOB2Q14106 344 aaPredicted RBP9.57□□□□□ -0.88
GPC6-202ENST00000617456 Q4G0T1 1027 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 PRR16Q569H4 304 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 GPR149Q86SP6 731 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 DDX53Q86TM3 631 aaKnown RBP9.57□□□□□ -0.88
GPC6-202ENST00000617456 SKAP1Q86WV1 359 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 KIAA2013Q8IYS2 634 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 LINC01465Q8N7H1 131 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 RSPH1Q8WYR4 309 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 RMDN1Q96DB5 314 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 IGSF21Q96ID5 467 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 HINFPQ9BQA5 517 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 CCDC94Q9BW85 323 aaPredicted RBP9.57□□□□□ -0.88
GPC6-202ENST00000617456 NRDE2Q9H7Z3 1164 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 SFXN1Q9H9B4 322 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 KCNK12Q9HB15 430 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 DACT1Q9NYF0 836 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 PCDHA4Q9UN74 947 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 DUSP12Q9UNI6 340 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 R4GN57 208 aa9.57□□□□□ -0.88
GPC6-202ENST00000617456 GPR179Q6PRD1 2367 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 MYH9P35579 1960 aaKnown RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 ESPNB1AK53 854 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 WDR64B1ANS9 1081 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 M0R2N6 131 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 CHMP2AO43633 222 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 LMNAP02545 664 aaKnown RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 OATP04181 439 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 GALTP07902 379 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 MYBP10242 640 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 CPA1P15085 419 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 PHKA2P46019 1235 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 SLC11A1P49279 550 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 JAK3P52333 1124 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 POLGP54098 1239 aaPredicted RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 PRKCEQ02156 737 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 TBC1D8BQ0IIM8 1120 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 GIT2Q14161 759 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 NFKBIBQ15653 356 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 PTPN14Q15678 1187 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 NOMO2Q5JPE7 1267 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 SPECC1Q5M775 1068 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 TWF2Q6IBS0 349 aaKnown RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 GLB1LQ6UWU2 654 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 DGLUCYQ7Z3D6 616 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 PPFIBP1Q86W92 1011 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 RSAD2Q8WXG1 361 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 PHKBQ93100 1093 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 LENG9Q96B70 501 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 MBOAT7Q96N66 472 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 KLHL5Q96PQ7 755 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 VN1R3Q9BXE9 311 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 SLC26A6Q9BXS9 759 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 EMILIN2Q9BXX0 1053 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 GCOM2Q9BZD3 368 aaPredicted RBP9.56□□□□□ -0.88
GPC6-202ENST00000617456 NRBP2Q9NSY0 501 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 DNAJB4Q9UDY4 337 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 CA14Q9ULX7 337 aa9.56□□□□□ -0.88
GPC6-202ENST00000617456 OTOGLQ3ZCN5 2332 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 MEIS3P2A8K0S8 358 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 C2CD2LO14523 706 aa9.55□□□□□ -0.88
GPC6-202ENST00000617456 ADAMTS3O15072 1205 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms